Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025.
1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters
Query= NC_019401.1
Length=358663
Score E
Sequences producing significant alignments: (Bits) Value
seq67459 84.2 5e-11
seq57906 84.2 5e-11
seq56574 84.2 5e-11
seq54090 84.2 5e-11
seq53963 84.2 5e-11
seq51578 84.2 5e-11
seq51241 84.2 5e-11
seq47400 84.2 5e-11
seq47332 84.2 5e-11
seq41886 84.2 5e-11
seq40799 84.2 5e-11
seq31309 84.2 5e-11
seq31253 84.2 5e-11
seq27609 84.2 5e-11
seq27367 84.2 5e-11
seq18935 84.2 5e-11
seq18669 84.2 5e-11
seq13842 84.2 5e-11
seq9533 84.2 5e-11
>seq67459
Length=23691
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 1352 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 1408
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 1409 ATTCCCGTCTCCGCA 1423
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 22222 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 22166
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 22165 ATTCCCGTCTCCGCA 22151
>seq57906
Length=39851
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 10319 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 10375
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 10376 ATTCCCGTCTCCGCA 10390
>seq56574
Length=20199
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 11952 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 11896
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 11895 ATTCCCGTCTCCGCA 11881
>seq54090
Length=35493
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 7620 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 7564
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 7563 ATTCCCGTCTCCGCA 7549
>seq53963
Length=25380
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 9094 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 9150
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 9151 ATTCCCGTCTCCGCA 9165
>seq51578
Length=7691
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 2720 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 2664
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 2663 ATTCCCGTCTCCGCA 2649
>seq51241
Length=22806
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 17364 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 17308
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 17307 ATTCCCGTCTCCGCA 17293
>seq47400
Length=50917
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 13860 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 13916
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 13917 ATTCCCGTCTCCGCA 13931
>seq47332
Length=37536
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 35898 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 35842
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 35841 ATTCCCGTCTCCGCA 35827
>seq41886
Length=41712
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 24357 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 24413
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 24414 ATTCCCGTCTCCGCA 24428
>seq40799
Length=7435
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 424 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 480
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 481 ATTCCCGTCTCCGCA 495
>seq31309
Length=10666
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 6231 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 6175
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 6174 ATTCCCGTCTCCGCA 6160
>seq31253
Length=20747
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 15204 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 15148
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 15147 ATTCCCGTCTCCGCA 15133
>seq27609
Length=16448
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 11367 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 11311
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 11310 ATTCCCGTCTCCGCA 11296
>seq27367
Length=17126
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 13423 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 13479
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 13480 ATTCCCGTCTCCGCA 13494
>seq18935
Length=23869
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 2361 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 2417
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 2418 ATTCCCGTCTCCGCA 2432
>seq18669
Length=17634
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 16352 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 16408
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 16409 ATTCCCGTCTCCGCA 16423
>seq13842
Length=41546
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 22839 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 22783
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 22782 ATTCCCGTCTCCGCA 22768
>seq9533
Length=8428
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479
||||||||||||||| |||||||| | |||||||||||||||||||| || ||||||
Sbjct 1939 GCGGAGTAGAGCAGTTTGGTAGCTCACGAGGCTCATAACCTTGAGGTCATG---GGTTCG 1995
Query 324480 AATCCCACCTCCGCA 324494
| |||| |||||||
Sbjct 1996 ATTCCCGTCTCCGCA 2010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1146582651379924
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |