Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025.
1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters
Query= NC_019929.1
Length=243050
Score E
Sequences producing significant alignments: (Bits) Value
seq66553 91.5 2e-13
seq16523 91.5 2e-13
seq68538 86.0 1e-11
seq68116 86.0 1e-11
seq67486 86.0 1e-11
seq59061 86.0 1e-11
seq58904 86.0 1e-11
seq58498 86.0 1e-11
seq38348 86.0 1e-11
seq34725 86.0 1e-11
seq29152 86.0 1e-11
seq9995 86.0 1e-11
seq6963 86.0 1e-11
seq1942 86.0 1e-11
>seq66553
Length=864877
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| || |||||||||||
Sbjct 211105 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGTTGCGGGTTCGAG 211047
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 211046 CCCCGTCAGTCC 211035
>seq16523
Length=209475
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| || |||||||||||
Sbjct 123133 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGTTGCGGGTTCGAG 123191
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 123192 CCCCGTCAGTCC 123203
>seq68538
Length=114112
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 15777 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 15835
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 15836 CCCCGTCAGTCC 15847
>seq68116
Length=3596336
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 991889 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 991831
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 991830 CCCCGTCAGTCC 991819
>seq67486
Length=14917
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 893 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 951
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 952 CCCCGTCAGTCC 963
>seq59061
Length=585534
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 77978 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 78036
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 78037 CCCCGTCAGTCC 78048
>seq58904
Length=213459
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 13322 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 13264
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 13263 CCCCGTCAGTCC 13252
>seq58498
Length=34119
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 16188 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 16130
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 16129 CCCCGTCAGTCC 16118
>seq38348
Length=14832
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 893 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 951
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 952 CCCCGTCAGTCC 963
>seq34725
Length=1886439
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 1864382 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 1864324
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 1864323 CCCCGTCAGTCC 1864312
>seq29152
Length=10424
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 9164 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 9222
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 9223 CCCCGTCAGTCC 9234
>seq9995
Length=12055
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 11667 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 11725
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 11726 CCCCGTCAGTCC 11737
>seq6963
Length=16478
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 1105 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 1047
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 1046 CCCCGTCAGTCC 1035
>seq1942
Length=387968
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 333142 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 333084
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 333083 CCCCGTCAGTCC 333072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 776965783224800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |