Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025. 1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq16495 127 2e-24 seq56172 125 5e-24 seq54907 116 3e-21 seq39779 116 3e-21 seq4230 116 3e-21 seq35365 113 3e-20 seq14904 113 3e-20 seq38869 109 4e-19 seq35796 109 4e-19 seq33789 109 4e-19 seq56035 91.5 1e-13 seq15291 87.8 1e-12 seq14978 86.0 5e-12 >seq16495 Length=532983 Score = 127 bits (140), Expect = 2e-24 Identities = 160/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| ||| || |||||||| || || || || ||||| |||| || || ||| Sbjct 85417 AGCACCAGATGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCAAGTGTCCGCCCATCC 85358 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || ||||||||| | || | | ||||||||||| || || ||||| || ||| Sbjct 85357 TCGAGCTGCTTGCCAGCAAAGATGAGCCGCTGCTGATCCGGTGGGATTCCCTCCTTATCT 85298 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 |||| ||| |||||| | || | || ||||| || || |||| || || || Sbjct 85297 TGTATCTTTGCGTTGACATTATCGATTGTATCAGACGACTCAACCTCAACTGTGATGGTC 85238 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAAC 29794 |||||||| | ||| || ||||| |||||||| | |||| Sbjct 85237 TTGCCAGTGAGGGTCTTCACAAAGATCTGCATCTGCAAAC 85198 Score = 127 bits (140), Expect = 2e-24 Identities = 158/215 (73%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| || || || || || || |||||||||||||| || | |||||| | Sbjct 85876 CGAAGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAGAGTGCGACCA 85817 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || |||||| | |||| | |||||| ||||| ||||| ||||| ||| Sbjct 85816 TCCTCAAGCTGCTTACCAGCAAAGATCAGGCGTTGCTGGTCCGGGGGAATGCCCTCCTTG 85757 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || || || || | ||||| ||| ||| ||||| || || || Sbjct 85756 TCCTGGATCTTCGCCTTCAC-GTGTCGATGGTGTCTGAAGATTCCACTTCCAGGGTGATG 85698 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| || || || ||||| |||||||| Sbjct 85697 GTCTTGCCAGTCAATGTCTTGACAAAGATCTGCAT 85663 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| || || ||||| ||||| || ||||| ||||| |||| || | Sbjct 39565 ACGGAGAACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTTGCCC 39506 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| ||||||||| | ||||| || ||||| || | || || ||||| || Sbjct 39505 ATCCTCAAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTAGGGGGATGCCCTCCTT 39446 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | ||| |||||| | || | |||||||| || ||||||||||| || Sbjct 39445 GTCCTGGATCTTTGCCTTGACATTGTCAATCGTGTCAGAGGACTCGACTTCAAGAGTGAT 39386 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||| ||| | || || ||||| |||||||| Sbjct 39385 GGTCTTGCAAGTGAGTGTCTTCACAAAGATCTGCAT 39350 Score = 122 bits (134), Expect = 7e-23 Identities = 158/217 (73%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || ||||| ||||| || ||||| ||||| |||| ||||| Sbjct 85650 ACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGCAAGTGTGCGCCC 85591 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCC-GGCGGAATACCCTCTT 29689 ||| || ||||||||||| ||| | ||||| | ||||| ||| || || || ||||| | Sbjct 85590 ATCCTCAAGTTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCCGGGGGGGATGCCCTCCT 85531 Query 29690 TGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||| | | || ||||||| | || | ||||| ||| || || || || || | Sbjct 85530 TGTCCTAGATCTTCGCTTTGACATTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTGA 85471 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || | |||||| ||||| || ||||| Sbjct 85470 TGGTCTTGCCGGTGAGGGTTTTCACAAAGATTTGCAT 85434 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| || || || || || || |||||||| ||||| | | |||||| | Sbjct 267054 CGGAGCACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCAGTCAGAGTGCGACCA 266995 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || ||||| || | |||| | ||||||||||| || |||||||| || Sbjct 266994 TCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCCGGGGGGATACCCTCCTTA 266935 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | | ||| ||| | || | ||||||||| || || || || || || Sbjct 266934 TCCTGGATCCTGGCTTTAACATTGTCAATGGTGTCAGAAGACTCAACATCTAGGGTAATG 266875 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | |||||||| ||||| || ||||| || ||||| Sbjct 266874 ATCTTGCCAGTCAAGGTCTTCACAAAGATTTGCAT 266840 >seq56172 Length=445662 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || ||||| || || || ||||| || || |||| |||||| ||| Sbjct 408469 AGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCC 408410 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || ||||||||| | || | | ||||| ||||| || |||||||| ||||| Sbjct 408409 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGTGGGATACCCTCCTTGTCC 408350 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || || ||| | || | ||||| || || || || || || || ||| Sbjct 408349 TGGATCTTGGCCTTCACATTATCAATGGTGTCTGAGGACTCAACCTCGAGGGTGATGGTT 408290 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| | ||| || |||||||||||||| Sbjct 408289 TTGCCAGTGAGGGTCTTGACAAATATCTGCAT 408258 Score = 118 bits (130), Expect = 8e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616 || || || | || ||| |||||||| ||||| ||||| || || || ||||| || ||| Sbjct 242251 TGGCCACCACGCAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCC 242310 Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676 |||| ||||||| ||| || || || |||||||| | || | | ||||| ||||| Sbjct 242311 GCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGG 242370 Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736 ||||| ||||| ||||| || | || || ||| | || | ||||| || || Sbjct 242371 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCCGAGGACTCA 242430 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | || || || ||||| || | ||| || || ||||||||||| Sbjct 242431 ACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTTACGAATATCTGCAT 242480 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| || || ||||| || || || ||||| || ||||||| |||||| ||| Sbjct 242497 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCC 242556 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || ||||||||| | || | | ||||| ||||| || || ||||| ||||| Sbjct 242557 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATTCCCTCCTTGTCC 242616 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||||| | || | ||||| || || || ||||| || || || Sbjct 242617 TGGATCTTGGCCTTGACGTTATCGATGGTGTCCGAGGACTCAACCTCAAGCGTGATGGTC 242676 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | ||| || || ||||||||||| Sbjct 242677 TTGCCGGTGAGGGTCTTTACGAATATCTGCAT 242708 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| ||||| ||||| || || || ||||| || ||||| | |||||| Sbjct 409157 ACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAAGGTGCGGCC 409098 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | || | | ||||| ||||| ||||| ||||| || Sbjct 409097 ATCCTCAAGCTGCTTACCGGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTT 409038 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || || | || | |||||||| || || || || || || Sbjct 409037 GTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCAGATGACTCCACCTCCAGGGTGAT 408978 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | ||| || |||||||||||||| Sbjct 408977 GGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 408942 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616 || || || | || ||| |||||||| ||||| ||||| || || || ||||| || ||| Sbjct 373409 TGGCCACCGCGCAGACGGAGCACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCC 373350 Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676 || | ||||| ||| || || || ||||| ||| | || | | ||||| ||||| Sbjct 373349 GCCAAAGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGG 373290 Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736 ||||| ||||| ||||| || | || || ||| | || | ||||| || || Sbjct 373289 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAGGACTCA 373230 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || ||||| || | ||| || || ||||||||||| Sbjct 373229 ACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAATATCTGCAT 373180 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| || || |||||||| || || ||||| || || || | |||||| ||| Sbjct 372935 AGCACCAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCC 372876 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || |||||||| | || | | ||||||||||| || || ||||| ||||| Sbjct 372875 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCCTCCTTGTCC 372816 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||||| | || | ||||| || || || || || || || || Sbjct 372815 TGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 372756 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | ||| || ||||| |||||||| Sbjct 372755 TTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 372724 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 |||||||| || || ||||| || || || ||||| || || || | ||| || ||| Sbjct 385039 CAGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTCCGGCCATC 384980 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || || || ||||| ||| | || | | ||||||||||| || || ||||| ||||| Sbjct 384979 CTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCCGGAGGGATGCCCTCCTTGTC 384920 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || ||||| | || | ||||| || || || || || || || || Sbjct 384919 CTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGGACTCAACCTCGAGGGTGATGGT 384860 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | ||| || ||||| |||||||| Sbjct 384859 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 384827 >seq54907 Length=1337563 Score = 116 bits (128), Expect = 3e-21 Identities = 155/214 (72%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 29573 GCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAAT 29632 |||| || | |||||| |||||||||||||| ||||||||||| || | ||| || || Sbjct 281270 GCAGGACAAGATGAAGAGTGGATTCTTTTTGGATGTTATAATCTGCCAAGGTACGCCCAT 281329 Query 29633 CATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGT 29692 | || || || || || ||| | || | || |||||||| || ||||| ||||| |||| Sbjct 281330 CCTCCAGCTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAGGAATTCCCTCCTTGT 281389 Query 29693 CTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 | || | || || ||| | || | ||||| || || || ||||||| || | Sbjct 281390 CCTGGATCTTGGCCTTCACATTATCGATGGTGTCGGAGCTCTCCACCTCAAGAGCGATGG 281449 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || | |||||| || || ||||| |||||||| Sbjct 281450 TCTTTCAAGTTAATGTCTT-ACAAAAATCTGCAT 281482 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||| ||||| || || || || ||||| || ||||| || | ||| | | Sbjct 281726 CGTAGGACCAGGTGAAGGGTAGACTCCTTCTGAATATTGTAATCAGCCAAAGTGTGCCCA 281785 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || || || ||| | || | || ||||| || ||| | ||||| || || Sbjct 281786 TCCTCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCAGGCAGGATACCTTCCTTA 281845 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || ||| | || | ||||| || || ||||||||||| || Sbjct 281846 TCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCCACTTCAAGAGTGATG 281905 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||||| || || |||||||||||||| Sbjct 281906 GTCTTTCCAGTTAGCGTCTTGACAAATATCTGCAT 281940 >seq39779 Length=478605 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| || || ||||| || || || ||||| || || |||| ||| ||| | Sbjct 442118 CGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGACCA 442177 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || ||||||||| | || | | ||||| ||||| || |||||||| ||| Sbjct 442178 TCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTG 442237 Query 29692 TCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || | ||| || | ||||| | || | ||||| || || || ||||| || || Sbjct 442238 TCCTA-AATCTTCGCCTTGACGTTGTCGATGGTGTCCGATGACTCAACCTCAAGGGTGAT 442296 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | ||| || |||||||||||||| Sbjct 442297 GGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 442332 >seq4230 Length=34917 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| || || ||||| || || || ||||| || || |||| ||| ||| | Sbjct 31853 CGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGACCA 31912 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || ||||||||| | || | | ||||| ||||| || |||||||| ||| Sbjct 31913 TCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTG 31972 Query 29692 TCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || | ||| || | ||||| | || | ||||| || || || ||||| || || Sbjct 31973 TCCTA-AATCTTCGCCTTGACGTTGTCGATGGTGTCCGATGACTCAACCTCAAGGGTGAT 32031 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | ||| || |||||||||||||| Sbjct 32032 GGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 32067 >seq35365 Length=683187 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||||||||| || | ||||| ||||| || || || ||||| || || ||| Sbjct 508749 CCACCACGCAAACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 508808 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | || || || || |||||||| | || | | ||||| ||||||||| Sbjct 508809 AGGGTCCTCCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGCGGA 508868 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || |||||| | || | |||||||| || || Sbjct 508869 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGACGACTCCACC 508928 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || ||||| || | || || |||||||||||||| Sbjct 508929 TCAAGGGTGATGGTCTTGCCCGTGAGTGTCTTCACAAATATCTGCAT 508975 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||||||||| | || || ||||| || || || ||||| || || ||| Sbjct 481576 CCACCACGCAGACGCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 481635 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || |||||||| | || | | ||||| || || ||| Sbjct 481636 AGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 481695 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| || || || | || |||||| | || | ||||| || || || Sbjct 481696 ATACCCTCCTTATCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCAACC 481755 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || ||||| || | ||| || |||||||||||||| Sbjct 481756 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 481802 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| || | || || ||||| || || || ||||| || || ||| Sbjct 508293 CCACCACGCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 508352 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || |||||||| | || | | ||||| ||||| ||| Sbjct 508353 AGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGA 508412 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| || || || | || ||||| | || | ||||| || || || Sbjct 508413 ATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACC 508472 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || ||||| | ||| || || || |||||||| Sbjct 508473 TCCAGAGTGATGGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 508519 >seq14904 Length=321791 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| ||| || ||||| || || || || || ||||| |||| || || ||| Sbjct 31150 AGCACCAGATGGAGGGTGGACTCCTTCTGGATATTGTAATCAGCAAGTGTCCGGCCATCC 31091 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| |||||||||||| | || | | ||||| || ||||| || ||||| ||||| Sbjct 31090 TCGAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 31031 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| |||||| | || | |||||||| || || ||||| || || || Sbjct 31030 TGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGGACTCGACCTCAAGTGTGATGGTC 30971 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || | || || ||||| |||||||| Sbjct 30970 TTTCCGGTGAGAGTCTTCACAAAGATCTGCAT 30939 >seq38869 Length=164459 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| || | |||||||| || || || || ||||| |||| |||||| Sbjct 42852 CGGAGCACCAGGTGCAAGGTGGATTCCTTCTGGATATTGTAATCAGCAAGGGTGCGCCCG 42911 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||||||| | |||| | |||| ||||| || || ||||| || Sbjct 42912 TCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTCGTCCGGAGGGATTCCCTCCTTA 42971 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || |||||| | || | ||||||| ||| || |||||||| || Sbjct 42972 TCCTGGATCTTGGCCTTGACATTGTCAATCATGTCAGAGGATTCGACCTCAAGAGTGATG 43031 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || | || || || ||||||||||| Sbjct 43032 GTTTTGCCGGTGAGTGTCTTCACGAATATCTGCAT 43066 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||| | || || || || || || ||||| || ||||| || | || ||| | Sbjct 42624 CGGAGCACTAGGTGCAGAGTAGACTCCTTCTGAATATTGTAATCAGCCAGAGTACGACCA 42683 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || | ||| || || || ||| | || | | ||||| ||||| ||||||||||| ||| Sbjct 42684 TCCTTGAGCTGCTTACCGGCAAAGATTAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTG 42743 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || ||| | || | ||||| || || ||||| || || ||| Sbjct 42744 TCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCCAAAGACTCCACTTCCAGGGTGATA 42803 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||||| | ||| || || || |||||||| Sbjct 42804 GTCATGCCAGTAAGGGTCTTGACGAAAATCTGCAT 42838 >seq35796 Length=307016 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| || || ||||| || || |||||||| ||||| || | ||||| Sbjct 306213 CGGAGCACCAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCG 306272 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || ||||| || | |||| | |||||||||||||| || ||||| ||| Sbjct 306273 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGCGGGATGCCCTCCTTG 306332 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | ||| || || | || | |||||||| || || ||||| || ||| Sbjct 306333 TCCTGGATCTTTGCCTTACCATTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATA 306392 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | | | || || || |||||||| Sbjct 306393 GTCTTGCCGGTGAGGCTCTTCACGAAGATCTGCAT 306427 >seq33789 Length=94561 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||||| || || ||||| || || |||||||| ||||| || | ||||| Sbjct 76813 CGGAGCACCAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAATCGGCGAGCGTGCGGCCG 76754 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || ||||| || | |||| | |||||||||||||| || ||||| ||| Sbjct 76753 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGCGGGATGCCCTCCTTG 76694 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | ||| || || | || | |||||||| || || ||||| || ||| Sbjct 76693 TCCTGGATCTTTGCCTTACCATTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATA 76634 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | | | || || || |||||||| Sbjct 76633 GTCTTGCCGGTGAGGCTCTTCACGAAGATCTGCAT 76599 >seq56035 Length=248427 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||| | | ||| |||||||| ||||| || ||||| |||||||| ||||| || Sbjct 205643 TCCACCCCTGAGCCTCAGGACCAAATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGC 205702 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || || ||| || | || || |||||| | || | ||||||||||| || || Sbjct 205703 TAATGTTCGCCCATCTTCCAACTGCTTTCCAGCAAAAATTAGCCTTTGCTGATCTGGGGG 205762 Query 29679 AATACCCTCTTTGTCTTG 29696 ||| ||||| ||||| || Sbjct 205763 AATGCCCTCCTTGTCCTG 205780 >seq15291 Length=288864 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| ||||| || || || || |||||||| || || |||| ||||| ||| Sbjct 51067 AGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGCGTGCGTCCATCT 51008 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | || |||||||| ||||||| | ||||||||||| ||||| || || ||||| Sbjct 51007 TCCAACTGCTTGCCAGCGAATATCAAACGCTGCTGATCCGGAGGAATCCCTTCCTTGTCC 50948 Query 29695 TGT 29697 ||| Sbjct 50947 TGT 50945 >seq14978 Length=2102471 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||| | ||| ||||||||||| || || ||||| |||||||| ||||| || Sbjct 1653160 CCACCCCTCAGCCTCAGGACCAAATGAAGTGTCGACTCTTTCTGAATGTTGTAATCAGCT 1653101 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || || || || |||||| | || | |||||||| || || || Sbjct 1653100 AATGTCCGTCCATCTTCCAGCTGCTTTCCAGCAAAAATTAGCCTTTGCTGGTCTGGTGGG 1653041 Query 29680 ATACCCTCTTTGTCTTG 29696 || || || ||||| || Sbjct 1653040 ATGCCTTCCTTGTCCTG 1653024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384897423753858