Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025.
1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters
Query= NC_023549.1
Length=56789
Score E
Sequences producing significant alignments: (Bits) Value
seq68538 86.0 2e-12
seq68353 86.0 2e-12
seq68116 86.0 2e-12
seq58498 86.0 2e-12
seq34725 86.0 2e-12
seq29563 86.0 2e-12
seq29152 86.0 2e-12
seq15112 86.0 2e-12
seq9995 86.0 2e-12
seq6963 86.0 2e-12
seq68117 82.4 3e-11
seq67459 80.6 1e-10
seq57906 80.6 1e-10
seq56574 80.6 1e-10
seq54090 80.6 1e-10
seq53963 80.6 1e-10
seq51578 80.6 1e-10
seq51241 80.6 1e-10
seq47400 80.6 1e-10
seq47332 80.6 1e-10
seq41886 80.6 1e-10
seq40799 80.6 1e-10
seq31309 80.6 1e-10
seq31253 80.6 1e-10
seq27609 80.6 1e-10
seq27367 80.6 1e-10
seq18935 80.6 1e-10
seq18669 80.6 1e-10
seq13842 80.6 1e-10
seq9533 80.6 1e-10
>seq68538
Length=114112
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 12720 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 12779
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 12780 GCTCTACTCCGC 12791
>seq68353
Length=2276501
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 1826770 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 1826711
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 1826710 GCTCTACTCCGC 1826699
>seq68116
Length=3596336
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 994941 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 994882
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 994881 GCTCTACTCCGC 994870
>seq58498
Length=34119
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 19228 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 19169
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 19168 GCTCTACTCCGC 19157
>seq34725
Length=1886439
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 1867407 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 1867348
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 1867347 GCTCTACTCCGC 1867336
>seq29563
Length=3194
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 77 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 18
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 17 GCTCTACTCCGC 6
>seq29152
Length=10424
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 6122 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 6181
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 6182 GCTCTACTCCGC 6193
>seq15112
Length=649736
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 337567 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 337508
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 337507 GCTCTACTCCGC 337496
>seq9995
Length=12055
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 8598 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 8657
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 8658 GCTCTACTCCGC 8669
>seq6963
Length=16478
Score = 86.0 bits (94), Expect = 2e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 4166 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 4107
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 4106 GCTCTACTCCGC 4095
>seq68117
Length=3308475
Score = 82.4 bits (90), Expect = 3e-11
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 1939452 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 1939393
Query 50172 GCTCTACTCC 50181
||||||||||
Sbjct 1939392 GCTCTACTCC 1939383
>seq67459
Length=23691
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 1423 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 1364
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 1363 GCTCTACTCCGC 1352
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 22151 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 22210
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 22211 GCTCTACTCCGC 22222
>seq57906
Length=39851
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 10390 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 10331
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 10330 GCTCTACTCCGC 10319
>seq56574
Length=20199
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 11881 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 11940
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 11941 GCTCTACTCCGC 11952
>seq54090
Length=35493
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 7549 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 7608
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 7609 GCTCTACTCCGC 7620
>seq53963
Length=25380
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 9165 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 9106
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 9105 GCTCTACTCCGC 9094
>seq51578
Length=7691
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 2649 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 2708
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 2709 GCTCTACTCCGC 2720
>seq51241
Length=22806
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 17293 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 17352
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 17353 GCTCTACTCCGC 17364
>seq47400
Length=50917
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 13931 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 13872
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 13871 GCTCTACTCCGC 13860
>seq47332
Length=37536
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 35827 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 35886
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 35887 GCTCTACTCCGC 35898
>seq41886
Length=41712
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 24428 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 24369
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 24368 GCTCTACTCCGC 24357
>seq40799
Length=7435
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 495 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 436
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 435 GCTCTACTCCGC 424
>seq31309
Length=10666
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 6160 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 6219
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 6220 GCTCTACTCCGC 6231
>seq31253
Length=20747
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 15133 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 15192
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 15193 GCTCTACTCCGC 15204
>seq27609
Length=16448
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 11296 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 11355
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 11356 GCTCTACTCCGC 11367
>seq27367
Length=17126
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 13494 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 13435
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 13434 GCTCTACTCCGC 13423
>seq18935
Length=23869
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 2432 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 2373
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 2372 GCTCTACTCCGC 2361
>seq18669
Length=17634
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 16423 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 16364
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 16363 GCTCTACTCCGC 16352
>seq13842
Length=41546
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 22768 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 22827
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 22828 GCTCTACTCCGC 22839
>seq9533
Length=8428
Score = 80.6 bits (88), Expect = 1e-10
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171
||||||| ||||| | |||||| | |||| ||| ||||||||| | |||||||| ||||
Sbjct 2010 TGCGGAGACGGGAATCGAACCCATGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 1951
Query 50172 GCTCTACTCCGC 50183
||||||||||||
Sbjct 1950 GCTCTACTCCGC 1939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181455395198556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |