Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025.
1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq59033 86.0 6e-12
seq16495 86.0 6e-12
>seq59033
Length=364465
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|| ||||| || || || |||||||| | |||| ||| || ||||| || ||
Sbjct 26252 GTGGATTCCTTCTGGATATTGTAATCAGCAAGGGTGCGTCCGTCCTCAAGTTGCTTGCCG 26311
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| ||||||| || ||||| || || || ||||| || ||||| || ||| ||
Sbjct 26312 GCAAAGATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTC 26371
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | |||||| | | || || |||| || | |||||||||||||||||
Sbjct 26372 ACATTGTCGATCGTGTCGGATGACTCAACCTCAAGTGTGATGGTCTTGCCGGTCAATGTC 26431
Query 137395 TTTACGAATATTTGCAT 137411
|| ||||| || |||||
Sbjct 26432 TTGACGAAGATCTGCAT 26448
>seq16495
Length=532983
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/229 (69%), Gaps = 1/229 (0%)
Strand=Plus/Minus
Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243
||| || || | ||| | ||| || || | || || ||||| || |||||||||||
Sbjct 85662 GCCACCACGGAGACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGC 85603
Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGAT-CGGGAG 137302
| ||||| | || || |||||||| || ||| |||||| || ||||| | |||| |
Sbjct 85602 AAGTGTGCGCCCATCCTCAAGTTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCCGGGGG 85543
Query 137303 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTA 137362
| ||||| || ||||| || || ||| | | || | |||||| | | || |
Sbjct 85542 GGATGCCCTCCTTGTCCTAGATCTTCGCTTTGACATTGTCGATCGTGTCGGAAGACTCAA 85483
Query 137363 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
| || | || | ||||||||||| | ||||| || || ||||||||
Sbjct 85482 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACAAAGATTTGCAT 85434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488125452141600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |