Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025. 1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq17655 89.7 2e-12 >seq17655 Length=1090806 Score = 89.7 bits (98), Expect = 2e-12 Identities = 125/174 (72%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 443698 GCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCT 443757 |||||| |||||| | ||||| || || ||||| || | || || |||| || Sbjct 172392 GCTTCGCCGAGCGCATCGTCGCCTTCGCCTGCGTCGAGGGCATCTTCTTCTCCGGCTCCT 172451 Query 443758 TTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAAC 443817 | || ||||||||||| | || ||||| || || |||| || || ||||| ||| Sbjct 172452 TCTGCG-CCATCTTCTGGCTCAAGAAGCGCGGGCTCATGCCGGGCCTCACCTTCTCCAAC 172510 Query 443818 GAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 || || ||| || |||||||| |||| |||||||||||||| || |||||| Sbjct 172511 GAGCTCATCTCCCGCGACGAGGGCCTGCACTGCGACTTCGCCTGCCTCCTCTAC 172564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1586941213661410