Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025. 1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq36031 82.4 4e-11 >seq36031 Length=340655 Score = 82.4 bits (90), Expect = 4e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 65090 GTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGA 65149 || |||||||| ||| ||| || | ||| ||||| || |||| ||||| |||| Sbjct 264867 GTACCAAACTGGCCACGGGGCTCCAAAAGATTGATATTATTGCTGCCAACAAAATCCTGA 264808 Query 65150 GCCATTCCGATAATTGCTGCAT-TTAAACTCGCTTCACCGTGATGATATCCTGAATGTTC 65208 |||||||| ||||||| ||| | || |||| ||||| || || ||| |||| ||||| Sbjct 264807 GCCATTCCTATAATTG-TGCTTGCTAGACTCTGCTCACCATGGTGGTATGCTGAGTGTTC 264749 Query 65209 AGAGACATATCCACTAAATTGAGCAAC 65235 || ||||| ||| |||| || || || Sbjct 264748 TGACACATAACCAATAAACTGTGCCAC 264722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235483134875700