Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025.
1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq16495 87.8 1e-12
>seq16495
Length=532983
Score = 87.8 bits (96), Expect = 1e-12
Identities = 162/232 (70%), Gaps = 7/232 (3%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||||||||| || || || || || || | || || || ||
Sbjct 85434 ATGCAAATCTTTGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 85493
Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGAT-GGAG 27906
||| ||| ||||| |||||| || || ||||| || || | || |||
Sbjct 85494 GACACGATCGACAAT--GTCAAAGCGAAGATCTAGGACAAGGAGGGCATCCCCCCCGGAC 85551
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTA 27965
||||| ||||| || |||||||| |||||| | || || | |||| |||| | |||||
Sbjct 85552 CAGCAGCGGTTGATCTTTGCCGGCAAACAACTTGAGGATGGGCGCACACTTG-CTGATTA 85610
Query 27966 CAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017
||||||||| |||||| ||| | || |||||| | ||| | ||||| |||
Sbjct 85611 CAACATCCAGAAAGAGTCCACCCTCCACTTGGTTCTCCGTCTCCGTGGTGGC 85662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355565145690726
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |