Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025.
1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq66718 102 1e-16
seq55038 84.2 3e-11
>seq66718
Length=721455
Score = 102 bits (112), Expect = 1e-16
Identities = 155/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813
|| || ||||||| ||| | ||||| | ||| | || | ||||| |||| ||| ||
Sbjct 180497 CCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAACATAGGAACAATCCCA 180556
Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873
|| ||||| ||||||||||| ||||||||| ||| |||||||| || || ||
Sbjct 180557 TTGGATGTCCCATTTGTTCCTCGAATATAACTCCCAGTAGCACGAATGTTGTGAACTGAG 180616
Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933
| || || ||||| || ||| || | |||||| || | || ||||||||
Sbjct 180617 ACACCAATCCCTCCAGCAGATTTGCTTATGACAGCACATTCCTTGAGAGTATCATAGATT 180676
Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974
||||| || |||||||| ||||| | ||| ||||||||
Sbjct 180677 CCCTCAATGCTATCATCTTTCATGCAGATAAGGAAACAGCT 180717
>seq55038
Length=538077
Score = 84.2 bits (92), Expect = 3e-11
Identities = 112/154 (73%), Gaps = 4/154 (3%)
Strand=Plus/Minus
Query 76493 TCTCTTTCATATTG--TGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAAC 76550
||||||||||||| |||| | | | | ||| ||||||||||| |||| ||||||
Sbjct 92159 TCTCTTTCATATTTGTTGTACAGATTC--TGAAACTCATCTCCCCAGCAATCAGCCAAAC 92102
Query 76551 CAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAA 76610
| ||| |||| | ||||| | |||||||| | ||| || | |||| || ||| |
Sbjct 92101 CTGGAGCTTCACTGGGACAAAATAATGACCATTGCTCATTTTTTTGCACCCTTTCCATGA 92042
Query 76611 AGAGATCAGGTATCCATAGAGCAATAAATAGATC 76644
| | |||||| ||||| |||||| ||| |||||
Sbjct 92041 ATAAATCAGGAATCCAGAGAGCATAAAAAAGATC 92008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712323611276160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |