Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 2e-11 seq3 82.4 7e-11 >seq2 Length=17334668 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| || || | ||| ||| || ||||||||||| ||||| || ||||| ||||| Sbjct 1903581 GATAAGGAGGGCATACCCCCAGACCAGCAAAGACTTATATTTGCTGGGAAACAGTTGGAA 1903522 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 ||| | || | || || ||||| |||||||||||||| || |||||| |||| || Sbjct 1903521 GATGGCCGCACCTTAGCAGACTACAACATTCAGAAGGAATCGACCCTTCACTTGGTTTT 1903463 >seq3 Length=16781886 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 29045 AAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAA 29104 ||||||| || || ||||| | ||| ||| || || || || |||||||| ||||| Sbjct 16131567 AAAAATTCAGGACAAGGAAGGCATCCCCTCAGACCAGCAGAGGCTCATCTTTGCTGGCAA 16131626 Query 29105 ACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||||| || || | |||| || ||||||||||| ||||||| ||||| ||||| || Sbjct 16131627 GCAACTCGAGGACGGGAGAACTCTGTCCGATTACAATGTTCAGAAAGAATCAACTCTCCA 16131686 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 29045 AAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAA 29104 ||||||| || || ||||| | ||| ||| || || || || |||||||| ||||| Sbjct 16199371 AAAAATTCAGGACAAGGAAGGCATCCCCTCAGACCAGCAGAGGCTCATCTTTGCTGGCAA 16199430 Query 29105 ACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||||| || || | |||| || ||||||||||| ||||||| ||||| ||||| || Sbjct 16199431 GCAACTCGAGGACGGGAGAACTCTGTCCGATTACAATGTTCAGAAAGAATCAACTCTCCA 16199490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428319665540495