Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq433 91.5 3e-13 seq21 91.5 3e-13 >seq433 Length=30188 Score = 91.5 bits (100), Expect = 3e-13 Identities = 152/215 (71%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 157258 GTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCAT 157317 ||||||| | || | ||||| || ||||||||||| |||||||| || || | ||||| Sbjct 24531 GTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGGGAGATGAGCTCCAT 24472 Query 157318 CCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTA 157377 ||| ||||| ||||||||| | ||||| |||| || | || || || | || || | Sbjct 24471 CCAGTCGAAGGGGTTGGCGACGGCGTACATCTTGGCGCAGCCGAG--GG--CGGCGAGGA 24416 Query 157378 ----GTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCG 157433 ||| || || |||| |||||||| ||||| || | || |||| ||| | Sbjct 24415 GGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGCGGCCGTTCATGCCGACGAGGG 24356 Query 157434 CGACGGGAAGCGCCGACG-AAATGAATTCGCACTC 157467 ||||||| || | || || | | ||| |||| ||| Sbjct 24355 CGACGGGGAG-GGCGTCGCAGACGAACTCGCGCTC 24322 >seq21 Length=10645290 Score = 91.5 bits (100), Expect = 3e-13 Identities = 152/215 (71%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 157258 GTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCAT 157317 ||||||| | || | ||||| || ||||||||||| |||||||| || || | ||||| Sbjct 999752 GTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGGGAGATGAGCTCCAT 999693 Query 157318 CCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTA 157377 ||| ||||| ||||||||| | ||||| |||| || | || || || | || || | Sbjct 999692 CCAGTCGAAGGGGTTGGCGACGGCGTACATCTTGGCGCAGCCGAG--GG--CGGCGAGGA 999637 Query 157378 ----GTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCG 157433 ||| || || |||| |||||||| ||||| || | || |||| ||| | Sbjct 999636 GGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGAGGCCGTTCATGCCGACGAGGG 999577 Query 157434 CGACGGGAAGCGCCGACG-AAATGAATTCGCACTC 157467 ||||||| || | || || | | ||| |||| ||| Sbjct 999576 CGACGGGGAG-GGCGTCGCAGACGAACTCGCGCTC 999543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073723352369472