Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq15 102 7e-17 >seq15 Length=11365478 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 5503 GCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTC 5562 ||| ||||||||||| ||||| |||| || || || ||| || | ||||| | Sbjct 10727584 GCCGGTGGACCCGAACCCGCCGACGCCCCTCTCGGTGGGGTCGAGATCGTCGACCTCCGC 10727643 Query 5563 CACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTAC 5622 || || || | | | ||| |||||| |||||| || ||||| || ||| || Sbjct 10727644 GACCTCTGGCGTCTCGATCCTCTCCAAGATCATCTGCGCGATCCGGTCCCCGCGCTTCAC 10727703 Query 5623 CTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGC 5682 |||| ||| || | ||||||||| || || | || || || ||||||||||| Sbjct 10727704 TGCGAAGTCGACGTCGGAGAAGTTGAAGAGGACGATCCCGACCGGCCCACGGTAGTCGGC 10727763 Query 5683 GTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGA 5733 ||| ||||| |||||||| |||||||| ||||||| |||||| || || Sbjct 10727764 GTCGATCACTCCCGCGCCGACGTCGATCGAGTGCTTCCACGCCAGCCCCGA 10727814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430038000009848