Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq559 569 6e-158 seq488 569 6e-158 seq3129 567 2e-157 seq3033 567 2e-157 seq7 154 4e-33 seq18 143 8e-30 seq5 100 8e-17 seq6 84.2 6e-12 >seq559 Length=26669 Score = 569 bits (630), Expect = 6e-158 Identities = 722/988 (73%), Gaps = 4/988 (0%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || ||||| ||||| | || |||||||| || | Sbjct 23367 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTG 23308 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| || ||||| | || || || || || || Sbjct 23307 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCTTTCATTGCTGCTCCT 23248 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || || ||||| ||||| || ||||| || ||||| || || || | |||||||| ||| Sbjct 23247 CCGGTGGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAATAAT 23188 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||||| || | |||| | || || ||||| |||||||||| || || Sbjct 23187 ATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATA 23128 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | | | ||||| ||||||||||| |||||||| ||| | || |||| Sbjct 23127 TGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 23068 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | ||||||||| | || ||||| || ||| | |||||||||| || | | Sbjct 23067 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 23008 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 | || ||| | || ||||| || |||||| |||| ||| | | || || ||| Sbjct 23007 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCAGTTGCTGCTGCAACTGCC 22948 Query 19710 GTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768 || ||||| | | || || |||| ||||| || ||| ||| ||||||||||| || || Sbjct 22947 GT-TTTCTTGATATATCCCATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGGAT 22889 Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828 ||||||||||| ||||| ||| | |||||||| || || ||||| ||||||||||| || Sbjct 22888 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 22829 Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888 || |||||| | ||||| ||||| |||||||| || ||||| ||| ||||||||| || Sbjct 22828 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCTCTATTCAGTGCTATGCATGG 22769 Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948 ||||| ||||| | |||| |||||| || || ||| ||| ||| | || Sbjct 22768 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGG 22709 Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008 || | ||||| ||||| ||||| || |||||||| || ||||| || || || ||||| Sbjct 22708 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGG 22649 Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068 ||||||| || ||||||||| |||||| ||||||||||||||||||||||| || || Sbjct 22648 CCGATTGATTTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGC 22589 Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128 ||| || || || || || ||| | ||| | | || ||| |||||||||||||||| Sbjct 22588 GGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAA 22529 Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAA 20187 | | |||||||| || || ||||| || ||||||||| ||||| || |||| | Sbjct 22528 CTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAA-GGTCGTGTAATTAATA 22470 Query 20188 CATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATG 20247 | ||||||||| | | ||| | |||||||| || | ||||||||||| || || |||| Sbjct 22469 CCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 22410 Query 20248 CTCATAACTTCCCACTTGATTTAGCTTC 20275 ||||||| ||||| || || |||||||| Sbjct 22409 CTCATAATTTCCCTCTAGACTTAGCTTC 22382 >seq488 Length=28536 Score = 569 bits (630), Expect = 6e-158 Identities = 722/988 (73%), Gaps = 4/988 (0%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || ||||| ||||| | || |||||||| || | Sbjct 23422 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTG 23363 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| || ||||| | || || || || || || Sbjct 23362 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCTTTCATTGCTGCTCCT 23303 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || || ||||| ||||| || ||||| || ||||| || || || | |||||||| ||| Sbjct 23302 CCGGTGGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAATAAT 23243 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||||| || | |||| | || || ||||| |||||||||| || || Sbjct 23242 ATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATA 23183 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | | | ||||| ||||||||||| |||||||| ||| | || |||| Sbjct 23182 TGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 23123 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | ||||||||| | || ||||| || ||| | |||||||||| || | | Sbjct 23122 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 23063 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 | || ||| | || ||||| || |||||| |||| ||| | | || || ||| Sbjct 23062 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCAGTTGCTGCTGCAACTGCC 23003 Query 19710 GTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768 || ||||| | | || || |||| ||||| || ||| ||| ||||||||||| || || Sbjct 23002 GT-TTTCTTGATATATCCCATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGGAT 22944 Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828 ||||||||||| ||||| ||| | |||||||| || || ||||| ||||||||||| || Sbjct 22943 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 22884 Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888 || |||||| | ||||| ||||| |||||||| || ||||| ||| ||||||||| || Sbjct 22883 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCTCTATTCAGTGCTATGCATGG 22824 Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948 ||||| ||||| | |||| |||||| || || ||| ||| ||| | || Sbjct 22823 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGG 22764 Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008 || | ||||| ||||| ||||| || |||||||| || ||||| || || || ||||| Sbjct 22763 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGG 22704 Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068 ||||||| || ||||||||| |||||| ||||||||||||||||||||||| || || Sbjct 22703 CCGATTGATTTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGC 22644 Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128 ||| || || || || || ||| | ||| | | || ||| |||||||||||||||| Sbjct 22643 GGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAA 22584 Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAA 20187 | | |||||||| || || ||||| || ||||||||| ||||| || |||| | Sbjct 22583 CTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAA-GGTCGTGTAATTAATA 22525 Query 20188 CATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATG 20247 | ||||||||| | | ||| | |||||||| || | ||||||||||| || || |||| Sbjct 22524 CCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 22465 Query 20248 CTCATAACTTCCCACTTGATTTAGCTTC 20275 ||||||| ||||| || || |||||||| Sbjct 22464 CTCATAATTTCCCTCTAGACTTAGCTTC 22437 >seq3129 Length=159636 Score = 567 bits (628), Expect = 2e-157 Identities = 720/985 (73%), Gaps = 4/985 (0%) Strand=Plus/Minus Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358 ||| | || || || || || || ||||| | || ||||| || || | ||||| ||| Sbjct 1075 TGGATAACCAGCACTGAAAATCGTCTTTACATTGGATGGTTCGGTGTTTTGATGATCCCT 1016 Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418 |||| | | || ||| || ||||| ||||||| || || || || || |||||| Sbjct 1015 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGAT 956 Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478 || ||||| || || || || ||||| || || ||| | || |||||||||||||| ||| Sbjct 955 ATTGATGGTATTCGCGAACCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 896 Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538 || || | |||| | || || ||||| |||| ||||| || ||||||||||| Sbjct 895 GGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATCTGGGAAGCA 836 Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598 | || | ||||||||||||||||| |||||||| ||| | || |||| | |||||| Sbjct 835 GCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 776 Query 19599 TTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATG 19658 ||| | || ||||| ||| ||| | |||||||||| || | | | || ||| Sbjct 775 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 716 Query 19659 AGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTC 19718 | || ||||| || |||||| |||| || | |||| ||| |||||| ||||| Sbjct 715 CGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTT 657 Query 19719 GTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTAC 19777 | | ||||| |||| ||||| ||||| ||||||||||||| | || ||||||||||| Sbjct 656 GATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATCTCTGGTAC 597 Query 19778 TTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 19837 ||| ||||||||| | |||||||| ||||| ||||| |||||||||||||| || ||||| Sbjct 596 TTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACAT 537 Query 19838 GCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGT 19897 | | ||||| ||||| |||||||| || || || ||| ||||||||| || ||||| Sbjct 536 GTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 477 Query 19898 TACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTT 19957 || || | |||| |||||| ||||| | | || || | || || | || Sbjct 476 AACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAGTCTGCTAATGAAGGTTACAGATT 417 Query 19958 CGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGAT 20017 ||| ||||| | ||| || ||||||||||| ||||| || || || ||||| |||| || Sbjct 416 CGGTCAAGAGGGAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTAAT 357 Query 20018 ATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCC 20077 || ||||||||| |||||| ||||||||||||||||||||||| | ||| ||| || Sbjct 356 CTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTGGCTGCTTGGCC 297 Query 20078 CGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGG 20137 || || || || ||| | || || | || || | ||||||||||||||||| ||||| Sbjct 296 TGTAGTAGGTATCTGGTTCACTTCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGG 237 Query 20138 TTTTAACTTTAACCAGTCAGTAGTTGA-TGTCAACGGAAAGATAATCCCAACATGGGCTG 20196 ||| || || ||||| ||||||||||| |||| | | || | | || ||||||| Sbjct 236 TTTCAATTTCAACCAATCAGTAGTTGACAGTCAGGGTCGTGTTATTAAC-ACTTGGGCTG 178 Query 20197 ATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACT 20256 || | | ||| | |||||||| || | ||||| ||||| || || |||||||| |||| Sbjct 177 ATATCATCAATCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCACAACT 118 Query 20257 TCCCACTTGATTTAGCTTCGGCTGA 20281 |||| || || ||||| | | ||| Sbjct 117 TCCCTCTAGACCTAGCTGCTGTTGA 93 >seq3033 Length=62413 Score = 567 bits (628), Expect = 2e-157 Identities = 720/985 (73%), Gaps = 4/985 (0%) Strand=Plus/Minus Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358 ||| | || || || || || || ||||| | || ||||| || || | ||||| ||| Sbjct 53624 TGGATAACCAGCACTGAAAATCGTCTTTACATTGGATGGTTCGGTGTTTTGATGATCCCT 53565 Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418 |||| | | || ||| || ||||| ||||||| || || || || || |||||| Sbjct 53564 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGAT 53505 Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478 || ||||| || || || || ||||| || || ||| | || |||||||||||||| ||| Sbjct 53504 ATTGATGGTATTCGCGAACCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 53445 Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538 || || | |||| | || || ||||| |||| ||||| || ||||||||||| Sbjct 53444 GGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATCTGGGAAGCA 53385 Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598 | || | ||||||||||||||||| |||||||| ||| | || |||| | |||||| Sbjct 53384 GCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 53325 Query 19599 TTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATG 19658 ||| | || ||||| ||| ||| | |||||||||| || | | | || ||| Sbjct 53324 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 53265 Query 19659 AGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTC 19718 | || ||||| || |||||| |||| || | |||| ||| |||||| ||||| Sbjct 53264 CGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTT 53206 Query 19719 GTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTAC 19777 | | ||||| |||| ||||| ||||| ||||||||||||| | || ||||||||||| Sbjct 53205 GATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATCTCTGGTAC 53146 Query 19778 TTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 19837 ||| ||||||||| | |||||||| ||||| ||||| |||||||||||||| || ||||| Sbjct 53145 TTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACAT 53086 Query 19838 GCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGT 19897 | | ||||| ||||| |||||||| || || || ||| ||||||||| || ||||| Sbjct 53085 GTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 53026 Query 19898 TACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTT 19957 || || | |||| |||||| ||||| | | || || | || || | || Sbjct 53025 AACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAGTCTGCTAATGAAGGTTACAGATT 52966 Query 19958 CGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGAT 20017 ||| ||||| | ||| || ||||||||||| ||||| || || || ||||| |||| || Sbjct 52965 CGGTCAAGAGGGAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTAAT 52906 Query 20018 ATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCC 20077 || ||||||||| |||||| ||||||||||||||||||||||| | ||| ||| || Sbjct 52905 CTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTGGCTGCTTGGCC 52846 Query 20078 CGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGG 20137 || || || || ||| | || || | || || | ||||||||||||||||| ||||| Sbjct 52845 TGTAGTAGGTATCTGGTTCACTTCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGG 52786 Query 20138 TTTTAACTTTAACCAGTCAGTAGTTGA-TGTCAACGGAAAGATAATCCCAACATGGGCTG 20196 ||| || || ||||| ||||||||||| |||| | | || | | || ||||||| Sbjct 52785 TTTCAATTTCAACCAATCAGTAGTTGACAGTCAGGGTCGTGTTATTAAC-ACTTGGGCTG 52727 Query 20197 ATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACT 20256 || | | ||| | |||||||| || | ||||| ||||| || || |||||||| |||| Sbjct 52726 ATATCATCAATCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCACAACT 52667 Query 20257 TCCCACTTGATTTAGCTTCGGCTGA 20281 |||| || || ||||| | | ||| Sbjct 52666 TCCCTCTAGACCTAGCTGCTGTTGA 52642 >seq7 Length=14728688 Score = 154 bits (170), Expect = 4e-33 Identities = 218/304 (72%), Gaps = 2/304 (1%) Strand=Plus/Plus Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358 ||| | || || || || || || ||||| | || ||||| || || | ||||| ||| Sbjct 2867517 TGGATAACCAGCACTGAAAATCGTCTTTACATTGGATGGTTCGGTGTTTTGATGATCCCT 2867576 Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCA-GCACCGCCTGTAGA 19417 |||| | | | ||| || ||||| ||||||| || || || || || ||||| Sbjct 2867577 ACCTTATTGACC-CAACTTCTGTATTTATTATCGCCTTCATTGCTTGCTCCTCCAGTAGA 2867635 Query 19418 TATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTC 19477 ||| ||||| || || || || ||||| || || ||| | || |||||||||||||| || Sbjct 2867636 TATTGATGGTATTCGCGAACCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTC 2867695 Query 19478 TGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGC 19537 ||| || | |||| | || || ||||| |||| ||||| || ||||||||||| Sbjct 2867696 TGGTGCCATTATTCCGACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATCTGGGAAGC 2867755 Query 19538 CGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTT 19597 | || | ||||||||||||| ||| |||||||| ||| | || |||| | ||||| Sbjct 2867756 AGCATCTGTTGATGAGTGGTTATGCAATGGCGGTCCTTATGAGCTAATTGTTCTACACTT 2867815 Query 19598 CTTA 19601 |||| Sbjct 2867816 CTTA 2867819 >seq18 Length=10911977 Score = 143 bits (158), Expect = 8e-30 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 19729 TTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTA 19788 |||| |||| ||||| | ||||||||||| | || |||||| ||||||| ||||||| Sbjct 6706506 TTGGCCAAGAAAGTTTCTCTCATGGTATGCCTTTAGGAATCTCTAGTACTTTCAACTTTA 6706447 Query 19789 TGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTG 19848 || | |||||||||| | |||||||||||| || ||||| || | |||| | ||||| | Sbjct 6706446 TGATTGTATTCCAAGTAAAACACAATATCCATACGCATCTATTTCTCATGTTAGGTGTAG 6706387 Query 19849 CTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCGA 19908 |||| |||||||| || || || ||| ||||||||| || ||||| || || Sbjct 6706386 CTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTT 6706327 Query 19909 TCATCAAGGAAACAACTGA 19927 | || ||| |||| ||||| Sbjct 6706326 TGATTAAGAAAACTACTGA 6706308 Score = 89.7 bits (98), Expect = 1e-13 Identities = 125/175 (71%), Gaps = 19/175 (11%) Strand=Plus/Minus Query 19696 CAGCAGCTCTTGCTGTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGT 19754 |||| ||| |||||| ||||| | | ||||| |||| |||| ||||| || Sbjct 421253 CAGCTGCTACTGCTGT-TTTCTTGATCTACCCTATTGGTCAAGAAAGTTTCTTTG----- 421200 Query 19755 ATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAAT 19814 || | || |||||| ||||||| ||||||||| | |||||||| ||||| ||||| Sbjct 421199 ----CTTTAGGAATCTCTAGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAAG 421144 Query 19815 --------ATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTATTCGG 19861 ||||||||||||| || |||||| | ||||| ||||| ||||| || Sbjct 421143 TGCACAACATCCTTATGCATCAATTTCACATGTTAGGTGTAGCTGGTGTATTTGG 421089 >seq5 Length=15024279 Score = 100 bits (110), Expect = 8e-17 Identities = 125/170 (74%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 19393 CCTTTATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGT 19452 ||||||| || | || || |||||||| ||||| || ||||| | ||||| || || | Sbjct 14840354 CCTTTATTGCTACTCCTCCGGTAGATATTGATGGTATTCGTGAACTTGTTTCGGGTTCTT 14840413 Query 19453 TAATGTACGGAAACAATATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGAC 19512 || | ||||||||||||||||| ||||| || | |||| | || || ||||| Sbjct 14840414 TACTTTACGGAAACAATATTATCTCTGGTGCCATTATTCCGACTTCTGCAGCCATAGGTT 14840473 Query 19513 TGCACTTTTATCCGATCTGGGAAGCCGGCACTTTAGATGAGTGGTTATAC 19562 |||| || ||||| |||| |||||| | || ||||||||| ||||| Sbjct 14840474 TGCATTTCTATCCAATCT-GGAAGCAGCATCTGCTGATGAGTGGCTATAC 14840522 Score = 98.7 bits (108), Expect = 3e-16 Identities = 140/197 (71%), Gaps = 19/197 (10%) Strand=Plus/Plus Query 19701 GCTCTTGCTGTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCC 19759 ||| ||||||| ||||| | | ||||| |||| |||| ||||| || | Sbjct 7273236 GCTATTGCTGT-TTTCTTGATCTACCCTATTGGTCAAGAAAGTTTCTCTG---------C 7273285 Query 19760 TCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAAT----- 19814 | | || |||||| ||||||| ||||||||| | ||||| || ||||| ||||| Sbjct 7273286 TTTAGGAATCTCTAGTACTTTCAACTTTATGATTGTATTTCAGGCAGAGCACAAGTGCAC 7273345 Query 19815 ---ATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTT 19871 ||||||||||||| || |||||| | ||||| ||||| ||||| || || || || Sbjct 7273346 AACATCCTTATGCATCAATTTCACATGTTAGGTGTAGCTGGTGTATTTGGCGGCTCCCTA 7273405 Query 19872 TTCTCTGCTATGCACGG 19888 ||| || |||||| || Sbjct 7273406 TTCAGTGGTATGCATGG 7273422 >seq6 Length=14747297 Score = 84.2 bits (92), Expect = 6e-12 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 19794 GTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGC 19853 |||||||| ||||| ||||| |||||||||||||| || |||||| | ||||| ||||| Sbjct 4210497 GTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGT 4210556 Query 19854 GTATTCGGTGG 19864 |||||||| || Sbjct 4210557 GTATTCGGCGG 4210567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144436233001524