Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 9e-15 >seq5 Length=15024279 Score = 96.9 bits (106), Expect = 9e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| || ||||| || | ||| || || ||| | |||||| | || | Sbjct 11649672 ATGAAAGAGGATAGTATTGAGGGAATTTATGATACTCTGAAGGAGTGTGCTGTCATAAGC 11649731 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATT 363741 || ||||| ||||||||||| || || ||||| |||||||| ||||||||| Sbjct 11649732 AAATCCGCAGGAGGAATTGGTGTTTCTATTCACAACATTCGTGCAACTGGGAGTTACATT 11649791 Query 363742 CGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801 || || ||| || || |||||| | ||||| ||||| || |||||| | ||||| Sbjct 11649792 CGTGGGACAAATGGGACTTCTAATGGGATTGTTCCTATGCTGCGAGTGTTTAATGATACT 11649851 Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 || | || || || || || || || ||| | || || Sbjct 11649852 GCTCGTTATGTTGATCAAGGGGGTGGCAAGAGGAAGGG 11649889 Score = 86.0 bits (94), Expect = 2e-11 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 111699 TGCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGAT 111758 |||||||||||||| | | || ||| |||||||||||||| |||||||| || ||| Sbjct 14736332 TGCCAGTTTTATGTGGAGAATGGAGAGCTATCATGCCAAATGTACCAGCGATCGGCAGAT 14736273 Query 111759 ATTGGTCTTGGTGTTCCGTTTAATATTGCA 111788 || || ||||| || || |||||||||||| Sbjct 14736272 ATGGGCCTTGGCGTGCCATTTAATATTGCA 14736243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303301348146878