Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 5e-12 seq8 84.2 2e-11 >seq7 Length=14728688 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| |||| || || |||| ||| |||| |||||| | | Sbjct 13849655 ATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAGAGCTCC 13849714 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||| |||||||| ||||| || || || || Sbjct 13849715 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCCCCGGACCAG 13849774 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || || || | | ||| ||||| ||||| || | | | | || ||| || ||| Sbjct 13849775 CAAAGGCTCATCTTTGCCGGGAAGCAGCTCGAGGACGGGCGCACCCTCGCCGACTACAAC 13849834 Query 24171 ATTCAAAAAGAATCTAC 24187 || ||||| ||||| || Sbjct 13849835 ATCCAAAAGGAATCCAC 13849851 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| |||| || || |||| ||| | || || ||| | | Sbjct 13849427 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTTGAGGTGGAGAGCTCC 13849486 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||| ||||| || || || || || ||||| Sbjct 13849487 GACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATTCCCCCGGATCAG 13849546 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||| ||||| ||||| || | | | | | || ||| || ||| Sbjct 13849547 CAGCGTCTCATCTTCGCCGGGAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAAC 13849606 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 || ||||| ||||| || ||||| Sbjct 13849607 ATCCAAAAGGAATCCACCCTTCAT 13849630 >seq8 Length=13970067 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || | |||||| | || || ||| | | Sbjct 10823950 ATGCAGATTTTCGTGAAGACCCTCACGGGTAAGACTATTACCCTTGAGGTGGAGAGCTCC 10823891 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| || || || ||||| || || ||||| Sbjct 10823890 GACACCATCGATAATGTCAAGGCCAAGATTCAGGATAAGGAGGGCATTCCCCCGGATCAG 10823831 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG-AAACGTCAGCGATTATAA 24169 ||| | ||||| | || ||| ||||| ||||| |||| | | | || | | ||||| || Sbjct 10823830 CAGCGTCTGATCTTCGCCGGGAAGCAGCTCGAGGATGGCCGCACACTTGCG-GATTACAA 10823772 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| || ||||| || || | || | ||||| || |||| || || Sbjct 10823771 CATCCAGAAAGAGTCCACCCTCCACCTCGTGTTGAGGCTGAGGGGGGG 10823724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429919604524995