Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq21 93.3 5e-14 seq19 93.3 5e-14 seq13 93.3 5e-14 seq15 91.5 2e-13 seq22 87.8 2e-12 seq17 86.0 7e-12 seq23 84.2 2e-11 seq12 84.2 2e-11 seq20 82.4 9e-11 >seq21 Length=10645290 Score = 93.3 bits (102), Expect = 5e-14 Identities = 77/93 (83%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 10314295 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 10314352 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||| || |||||| ||| ||||||||| || Sbjct 10314353 GGGTTCAAATCCCACAGCTGTCAAATTATTTTT 10314385 >seq19 Length=10815949 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/105 (82%), Gaps = 8/105 (8%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 10617080 AGTCAGGGTGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 10617137 Query 126321 GCGTGGGTTCGAACCCCACACCTGAC-AAATTATTATTGGAATTT 126364 |||||||||| || ||||| ||||| |||||||| ||| | ||| Sbjct 10617138 GCGTGGGTTCAAATCCCACTTCTGACAAAATTATT-TTGCACTTT 10617181 >seq13 Length=11759267 Score = 93.3 bits (102), Expect = 5e-14 Identities = 79/96 (82%), Gaps = 6/96 (6%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||| | ||||| || | Sbjct 2355166 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGCT--CCTCGTGAGAGGG 2355223 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||| || ||||| |||||||||| ||||| Sbjct 2355224 CGTGGGTTCAAATCCCACTTCTGACAAATTTTTATT 2355259 >seq15 Length=11365478 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/92 (83%), Gaps = 6/92 (7%) Strand=Plus/Plus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320 |||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 205070 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAG 205127 Query 126321 -GCGTGGGTTCGAACCCCACACCTGACAAATT 126351 |||||||||| || ||||| ||||||| || Sbjct 205128 GGCGTGGGTTCAAATCCCACTTCTGACAATTT 205159 >seq22 Length=10398566 Score = 87.8 bits (96), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 6/88 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 9397886 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGAGAGAGG 9397943 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAA 126348 |||||||||| || ||||| ||||||| Sbjct 9397944 GCGTGGGTTCAAATCCCACTTCTGACAA 9397971 >seq17 Length=11156084 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/91 (81%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 488372 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 488315 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATTA 126355 |||||| || |||||| ||| ||| || ||| Sbjct 488314 GGGTTCAAATCCCACAGCTGTCAATTTTTTA 488284 >seq23 Length=7979763 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 1988320 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 1988377 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 1988378 CGTGGGTTCAAATCCCACTTCTGACA 1988403 >seq12 Length=12612916 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 863249 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 863192 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 863191 CGTGGGTTCAAATCCCACTTCTGACA 863166 >seq20 Length=10792357 Score = 82.4 bits (90), Expect = 9e-11 Identities = 74/91 (81%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 2723659 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 2723716 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTG 126358 ||| || |||||| ||| ||| ||| |||| Sbjct 2723717 TTCAAATCCCACAGCTGTCAA--TATAATTG 2723745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556839019781960