Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-13 >seq3 Length=16781886 Score = 89.7 bits (98), Expect = 4e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||| ||||| || |||||||||||||| ||||| || || | |||| || |||||| Sbjct 16131599 ACCAGCAGAGGCTCATCTTTGCTGGCAAGCAACTCGAGGACGGGAGAACTCTGTCCGATT 16131658 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| ||||||| ||||| ||||| ||| | || | ||||| |||| || Sbjct 16131659 ACAATGTTCAGAAAGAATCAACTCTCCATCTTGTTCTCCGTTTGAGAGGGGG 16131710 Score = 89.7 bits (98), Expect = 4e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||| ||||| || |||||||||||||| ||||| || || | |||| || |||||| Sbjct 16199403 ACCAGCAGAGGCTCATCTTTGCTGGCAAGCAACTCGAGGACGGGAGAACTCTGTCCGATT 16199462 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| ||||||| ||||| ||||| ||| | || | ||||| |||| || Sbjct 16199463 ACAATGTTCAGAAAGAATCAACTCTCCATCTTGTTCTCCGTTTGAGAGGGGG 16199514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358111143022666