Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq7 163 7e-35 seq1443 149 1e-30 seq12 145 2e-29 seq13 122 2e-22 seq10 118 3e-21 seq8 114 3e-20 seq3 113 1e-19 >seq7 Length=14728688 Score = 163 bits (180), Expect = 7e-35 Identities = 175/230 (76%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| |||| ||| ||| || ||||| || ||||||||| Sbjct 13850337 CCACCGCGGAGGCGGAGCACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCG 13850278 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || ||||| |||||||||||||| || |||| Sbjct 13850277 AGGGTGCGGCCGTCCTCGAGCTGCTTACCTGCAAAGATCAGACGCTGCTGGTCCGGTGGG 13850218 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || || || |||||||| ||||| || || || || || | ||| ||| || Sbjct 13850217 ATCCCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCGATGGTGTCGGAGCTC---TCG 13850161 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| ||||| || ||||||||||| |||||||| Sbjct 13850160 ACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 13850111 Score = 159 bits (176), Expect = 8e-34 Identities = 178/235 (76%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||||||||| | || ||||| || | ||| ||| || ||||| || |||| Sbjct 13850113 CATG-CCACCGCGGAGGCGGAGGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGT 13850055 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||||||| ||||||||||| || | || || || |||||||| |||||||| || Sbjct 13850054 CGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCCG 13849995 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418 ||||| || || || |||||||| || || |||||||| || || | ||| ||| Sbjct 13849994 GGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTC- 13849936 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct 13849935 --TCGACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTCTTGACGAAGATCTGCAT 13849883 Score = 143 bits (158), Expect = 6e-29 Identities = 173/233 (74%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || || ||||||| ||| ||| |||||||| || ||||||||| Sbjct 13849653 CCGCCGCGGAGACGGAGGACAAGATGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCG 13849594 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| |||||||| ||| || ||| Sbjct 13849593 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGA---TCCGGG 13849537 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || || || |||||||| || || ||||| || || || | ||| ||| Sbjct 13849536 GGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAGCTC--- 13849480 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||||||||| || || || || ||||| |||||||| Sbjct 13849479 TCCACCTCAAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 13849427 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || || || ||||| || | ||| ||| |||||||| || ||||||||| Sbjct 13849881 CCACCCCTCAGCCTGAGCACGAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCG 13849822 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || ||||| || | || || ||| Sbjct 13849821 AGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCAAAGATGAGCCTTTGCTGGTCCGGGGGG 13849762 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || ||||| |||||||| || || |||||||| || || | ||| ||| || Sbjct 13849761 ATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTC---TCG 13849705 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| |||||||||||||| || || || |||||||| |||||||| Sbjct 13849704 ACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCAT 13849655 Score = 111 bits (122), Expect = 4e-19 Identities = 166/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || || || || | || || || ||||| || |||||||| Sbjct 13849425 CCGCCGCGGAGACGGAGCACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 13849366 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| ||| || ||| Sbjct 13849365 AGGGTTCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGA---TCCGGG 13849309 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || || || |||||||| || || || ||||| || || | ||| ||| Sbjct 13849308 GGAATCCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTC--- 13849252 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||||||||| ||||| || || || ||||| |||||||| Sbjct 13849251 TCCACCTCGAGGGTGATCGTCTTTCCGGTGAGGGTTTTCACGAAGATCTGCAT 13849199 >seq1443 Length=10899 Score = 149 bits (164), Expect = 1e-30 Identities = 173/232 (75%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | || ||||| || | ||| || || ||||| || |||| Sbjct 8176 CATG-CCGCCACGGAGACGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGT 8234 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| ||||| || || || || |||||||||||||||||||| || Sbjct 8235 CCGCAAGAGTGCGGCCGTCCTCCAACTGCTTGCCTGCGAAGATCAGACGCTGCTGGTCCG 8294 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || ||||||||||| || || || || || || | ||| || | Sbjct 8295 GGGGGATCCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATGGTGTCGGAGGACT 8354 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| ||||| ||||| |||||||| ||||||||||| |||||||| Sbjct 8355 CGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 8406 Score = 140 bits (154), Expect = 8e-28 Identities = 171/232 (74%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | || ||||| || | ||| || || ||||| || |||| Sbjct 8404 CATG-CCGCCACGGAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGT 8462 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | ||||| ||||| ||||| || || || || || |||||||||| ||||| || Sbjct 8463 CCGCGAGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCG 8522 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || ||||||||||| || || || || || || | ||| ||| | Sbjct 8523 GGGGGATCCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATGGTGTCGGACGACT 8582 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| ||||| ||||| |||||||| ||||||||||| || ||||| Sbjct 8583 CGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 8634 >seq12 Length=12612916 Score = 145 bits (160), Expect = 2e-29 Identities = 172/232 (74%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | || ||||| || | ||| || || ||||| || |||| Sbjct 12401245 CATG-CCGCCACGGAGACGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGT 12401187 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| ||||| || || || || || ||||||||||||||||| || Sbjct 12401186 CCGCCAGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCG 12401127 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || ||||||||||| || || || || || || | ||| || | Sbjct 12401126 GCGGGATCCCCTCCTTGTCCTGGATTTTTGCCTTAACATTGTCGATGGTGTCGGAGGACT 12401067 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| ||||| ||||| |||||||| ||||||||||| |||||||| Sbjct 12401066 CGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 12401015 Score = 136 bits (150), Expect = 9e-27 Identities = 170/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | || ||||| |||| ||| || || ||||| || |||| Sbjct 12400789 CATG-CCGCCACGGAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGT 12400731 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | ||||| || || ||||| || || || || || |||||||||| ||||| || Sbjct 12400730 CCGCGAGGGTCCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCG 12400671 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || ||||||||||| || || || || || || | ||| ||| | Sbjct 12400670 GAGGGATCCCCTCCTTGTCCTGGATTTTGGCCTTAACATTGTCGATGGTGTCGGACGACT 12400611 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| ||||| ||||| || ||||| ||||||||||| || ||||| Sbjct 12400610 CGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 12400559 Score = 131 bits (144), Expect = 4e-25 Identities = 169/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | || ||||| || | ||| || || ||||| || |||| Sbjct 12401017 CATG-CCGCCACGGAGACGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGT 12400959 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || ||||| || || || || || |||||||||| ||||| || Sbjct 12400958 CTGCAAGAGTCCGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCG 12400899 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || ||||||||||| || || || || || || | ||| || | Sbjct 12400898 GGGGGATCCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATGGTGTCGGAGGACT 12400839 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| ||||| ||||| |||||||| ||||||||||| |||||||| Sbjct 12400838 CGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 12400787 >seq13 Length=11759267 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | ||| || || ||||| || ||||| || Sbjct 11348186 CCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCT 11348127 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || | || || || |||||||| || ||||| ||| ||| Sbjct 11348126 AGGGTTCTCCCGTCCTCGAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGATCCGGGGGG 11348067 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| |||||||| || || | || || || || Sbjct 11348066 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGAGGACTCCACC 11348007 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||||||||| || || || || ||||| |||||||| Sbjct 11348006 TCCAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 11347960 >seq10 Length=13112115 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | ||| |||||||||| ||| ||| ||||| ||||| ||||| | Sbjct 3654266 CCGCCGCGAAGACGAAGCACGAGATGAAGGGTGGATTCCTTTTGAATATTGTAGTCCGAT 3654325 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || || ||||| || |||||||||||||| ||||| || | ||| Sbjct 3654326 AAGCACCGATCATCCTCCAATTGCTTCCCTGCGAAGATCAGCCGCTGCTGGTCAGGAGGG 3654385 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| |||| ||||| || | | | || |||| || Sbjct 3654386 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGGCAACGGTGTCGGAGCTC---TCG 3654442 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| || ||||| ||||| |||||||| Sbjct 3654443 ACCTCGAGAGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAGATCTGCAT 3654492 >seq8 Length=13970067 Score = 114 bits (126), Expect = 3e-20 Identities = 166/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | || ||||| |||| ||| ||| || ||||| || || || Sbjct 10823265 TGGCCACCACGGAGGCGGAGGACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCC 10823324 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || || ||||| || || || | || || || |||||||||| |||||| || Sbjct 10823325 GCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCGAAGATCAAACGCTGCTGGTCCGGC 10823384 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || || || || ||||| || || || ||||| || || |||| |||| ||| Sbjct 10823385 GGAATCCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATAGTATCGGAGCTC--- 10823441 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||||||||| ||||| || |||||||| || || ||||| Sbjct 10823442 TCAACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 10823494 Score = 113 bits (124), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 12/219 (5%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| ||||| || | |||| || || ||||| || ||||||||||| ||||| ||||| Sbjct 10824194 AAGAACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTC 10824253 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTT 288377 || | || || || |||||||| || ||||| || || ||| || ||||| || Sbjct 10824254 CTCGAGCTGCTTGCCGGCGAAGATAAGCCGCTGCTG---GTCCGGGGGAATGCCTTCCTT 10824310 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGT 288434 |||||||| || || || || || || || | || |||| || || || || || Sbjct 10824311 GTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTC---TCCACCTCAAGGGT 10824367 Query 288435 GATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| ||||| || || || ||||| |||||||| Sbjct 10824368 GATGGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 10824406 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || ||||||||||| || ||||| || || || | || || || |||||| Sbjct 10823532 TCCTTTTGAATGTTATAGTCGGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCGAAG 10823591 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || ||||| || || || ||||| || |||||||||||||| Sbjct 10823592 ATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCTTTCACGTTA 10823651 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || ||| ||| || || || || || ||||| || || || ||||| Sbjct 10823652 TCAATGGTGTCCGAGCT---TTCAACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTC 10823708 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 10823709 ACAAAGATCTGCAT 10823722 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/215 (71%), Gaps = 12/215 (6%) Strand=Plus/Plus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 ||||| || | ||| ||||| ||||| || || || || || ||||| || || || Sbjct 10823742 ACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGCAAGTGTGCGGCCATCCTCG 10823801 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCC 288381 | || || || ||||||||||||||||| || ||| ||| || || || |||||| Sbjct 10823802 AGCTGCTTCCCGGCGAAGATCAGACGCTGCTG---ATCCGGGGGAATGCCCTCCTTATCC 10823858 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATC 288438 || || || || || || || || || | || |||| || || || || || || Sbjct 10823859 TGAATCTTGGCCTTGACATTATCGATGGTGTCGGAGCTC---TCCACCTCAAGGGTAATA 10823915 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || ||||| ||||| |||||||| Sbjct 10823916 GTCTTACCCGTGAGGGTCTTCACGAAAATCTGCAT 10823950 >seq3 Length=16781886 Score = 113 bits (124), Expect = 1e-19 Identities = 167/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | ||| || | ||||| ||| || |||||||| || || || | Sbjct 16131939 TCCACCGCGGAGGCGAAGAACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTACTCTGA 16131880 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || || || || ||||| || || || || || || ||||| ||| || || Sbjct 16131879 TAAGGTCCGGCCATCCTCCAATTGCTTCCCAGCAAATATGAGCCGCTGCTGA---TCGGG 16131823 Query 288366 ---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 |||||||||||| || || ||||| | |||| |||||| || | || |||| Sbjct 16131822 AAGGATTCCTTCTTTGTCTTGAATTTTACCCTTCAGGTTTTCAATTGTGTCAGAGCTC-- 16131765 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || || || ||||| || || |||||||| Sbjct 16131764 -TCAACCTCGAGAGTGATGGTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCAT 16131712 Score = 113 bits (124), Expect = 1e-19 Identities = 167/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | ||| || | ||||| ||| || |||||||| || || || | Sbjct 16199743 TCCACCGCGGAGGCGAAGAACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTACTCTGA 16199684 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || || || || ||||| || || || || || || ||||| ||| || || Sbjct 16199683 TAAGGTCCGGCCATCCTCCAATTGCTTCCCAGCAAATATGAGCCGCTGCTGA---TCGGG 16199627 Query 288366 ---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 |||||||||||| || || ||||| | |||| |||||| || | || |||| Sbjct 16199626 AAGGATTCCTTCTTTGTCTTGAATTTTACCCTTCAGGTTTTCAATTGTGTCAGAGCTC-- 16199569 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || || || ||||| || || |||||||| Sbjct 16199568 -TCAACCTCGAGAGTGATGGTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCAT 16199516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179607107286462