Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq433 96.9 8e-15 seq21 96.9 8e-15 >seq433 Length=30188 Score = 96.9 bits (106), Expect = 8e-15 Identities = 295/455 (65%), Gaps = 6/455 (1%) Strand=Plus/Plus Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345 || || || ||||| |||||||||| | ||||| || || | | || ||||| Sbjct 24082 TCCTTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGCGTCTTCTTCTCCGGCTCC 24141 Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405 |||||||||||||| ||||| ||| || | ||||| |||||| | || ||| Sbjct 24142 TTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAAC 24201 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465 ||| ||||| |||||||||||||| ||| | |||| || | || || Sbjct 24202 GAGCTCATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACTCCCTC 24261 Query 243466 CTCCAGAACAAGCTACCATTCGAAACG---GTCAAACAAATCATCACAGAAGCAGTTGAA 243522 |||| | || || ||| | ||| ||| || || || || || Sbjct 24262 CTCCGCCGCCGCCTCCC---CGAGCCCCGCGTCCGCGCCATCGTCCGCGACGCCGTCGAC 24318 Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAA 243582 | ||| || ||| | |||||||| | || | || | ||||||||| Sbjct 24319 ATCGAGCGCGAGTTCGTCTGCGACGCCCTCCCCGTCGCCCTCGTCGGCATGAACGGCCGC 24378 Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642 |||||| | ||||||||||| ||||| ||||||||| | || ||| || || | | Sbjct 24379 CTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCGCCGCCCTCGGCTGCGCC 24438 Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702 || ||||| | | |||||||| | || ||||||||||| || || || || || Sbjct 24439 AAGATGTACGCCGTCGCCAACCCCTTCGACTGGATGGAGCTCATCTCCCTCCAGGGCAAG 24498 Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 || ||||||||||| ||||| ||| | || || || Sbjct 24499 ACCAACTTCTTCGAGAAGCGCGTCGGCGAGTACCA 24533 >seq21 Length=10645290 Score = 96.9 bits (106), Expect = 8e-15 Identities = 295/455 (65%), Gaps = 6/455 (1%) Strand=Plus/Plus Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345 || || || ||||| |||||||||| | ||||| || || | | || ||||| Sbjct 999303 TCCTTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGCGTCTTCTTCTCCGGCTCC 999362 Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405 |||||||||||||| ||||| ||| || | ||||| |||||| | || ||| Sbjct 999363 TTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAAC 999422 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465 ||| ||||| |||||||||||||| ||| | |||| || | || || Sbjct 999423 GAGCTCATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACTCCCTC 999482 Query 243466 CTCCAGAACAAGCTACCATTCGAAACG---GTCAAACAAATCATCACAGAAGCAGTTGAA 243522 |||| | || || ||| | ||| ||| || || || || || Sbjct 999483 CTCCGCCGCCGCCTCCC---CGAGCCCCGCGTCCGCGCCATCGTCCGCGACGCCGTCGAC 999539 Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAA 243582 | ||| || ||| | |||||||| | || | || | ||||||||| Sbjct 999540 ATCGAGCGCGAGTTCGTCTGCGACGCCCTCCCCGTCGCCCTCGTCGGCATGAACGGCCTC 999599 Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642 |||||| | ||||||||||| ||||| ||||||||| | || ||| || || | | Sbjct 999600 CTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCGCCGCCCTCGGCTGCGCC 999659 Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702 || ||||| | | |||||||| | || ||||||||||| || || || || || Sbjct 999660 AAGATGTACGCCGTCGCCAACCCCTTCGACTGGATGGAGCTCATCTCCCTCCAGGGCAAG 999719 Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 || ||||||||||| ||||| ||| | || || || Sbjct 999720 ACCAACTTCTTCGAGAAGCGCGTCGGCGAGTACCA 999754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102835785196150