Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq13 147 5e-30 seq7 147 5e-30 seq4 147 5e-30 seq8 138 3e-27 seq10 134 3e-26 seq12 129 1e-24 seq3 122 2e-22 seq1443 120 7e-22 >seq13 Length=11759267 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| || | || || || || Sbjct 11348171 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCTAGGGTTCTCCCGTCC 11348112 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||||||||| |||||||| ||||| || || || ||| Sbjct 11348111 TCGAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGATCCGGGGGGATCCCCTCCTTGTCC 11348052 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||| | | || || |||| ||||||||| Sbjct 11348051 TGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGAGGACTCCACCTCCAGGGTGATCGTC 11347992 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || |||||||| || || || Sbjct 11347991 TTCCCCGTTAGGGTTTTCACGAAGATCTG 11347963 >seq7 Length=14728688 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| ||||||||||| |||| ||||||||| || | || | || || Sbjct 13849410 AGCACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCC 13849351 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| |||||||| ||||| ||| || || ||| Sbjct 13849350 TCGAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGATCCGGGGGAATCCCCTCCTTGTCC 13849291 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||||||| Sbjct 13849290 TGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATCGTC 13849231 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| |||||||| || || || Sbjct 13849230 TTTCCGGTGAGGGTTTTCACGAAGATCTG 13849202 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || || |||||||||| ||||||||| || | || | || || Sbjct 13849638 AGGACAAGATGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 13849579 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||||||||| ||||| ||| || || ||| Sbjct 13849578 TCGAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATCCCCTCCTTGTCC 13849519 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| |||||| | | || || || | ||||||||| Sbjct 13849518 TGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATCGTC 13849459 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || |||||||| || || || Sbjct 13849458 TTCCCCGTTAGGGTTTTCACGAAGATCTG 13849430 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || || ||||| |||| ||||||||| || | || | ||| || Sbjct 13850094 AGGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCC 13850035 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||||||||||||||| || || || ||| Sbjct 13850034 TCGAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 13849975 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || || | ||||||||| Sbjct 13849974 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTC 13849915 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || || || || Sbjct 13849914 TTCCCCGTTAGGGTCTTGACGAAGATCTG 13849886 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || || || || |||||||| || || |||||||||| ||||||||| || | || | Sbjct 13849872 AGCCTGAGCACGAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCGAGGGTGCGC 13849813 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || || || |||||||| ||||| |||||||| | ||||||||||| || || ||| Sbjct 13849812 CCGTCCTCGAGCTGCTTCCCGGCAAAGATGAGCCTTTGCTGGTCCGGGGGGATGCCCTCT 13849753 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| ||||||| |||| |||||| | | || || || | ||| Sbjct 13849752 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTG 13849693 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| ||||| || ||||| || || || || Sbjct 13849692 ATCGTCTTCCCCGTTAGGGTTTTGACGAAGATCTG 13849658 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || || ||||| |||| ||||||||| || | || | || || Sbjct 13850322 AGCACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 13850263 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| ||||||||||||||||| || || || ||| Sbjct 13850262 TCGAGCTGCTTACCTGCAAAGATCAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCC 13850203 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || || | ||||||||| Sbjct 13850202 TGGATCTTCGCCTTGACATTGTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTC 13850143 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 13850142 TTGCCGGTGAGGGTCTTGACGAAGATCTG 13850114 >seq4 Length=15584765 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| || | || | ||||| Sbjct 384519 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGCCCATCC 384460 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| |||||||| || || || ||||| ||| Sbjct 384459 TCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGATCGGGGGGGATCCCTTCCTTGTCC 384400 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| |||||| |||| ||||| | | || || || | ||||| ||| Sbjct 384399 TGGATCTTTGCCTTCACATTGTCGATCGTGTCCGAGGACTCCACCTCAAGGGTGATTGTC 384340 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || |||||||| || || Sbjct 384339 TTCCCCGTGAGGGTCTTCACAAAGATCTG 384311 >seq8 Length=13970067 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| || ||||||||||| | ||| ||||| || | || | ||||| Sbjct 10823511 AGAACAAGGTGGAGGGTGGACTCCTTTTGAATGTTATAGTCGGCAAGGGTGCGGCCATCC 10823570 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||||||||| ||||||||||||||| || || || ||| Sbjct 10823571 TCAAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 10823630 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| || | |||||| | |||| || || | || || ||| Sbjct 10823631 TGAATCTTCGCTTTCACGTTATCAATGGTGTCCGAGCTTTCAACCTCAAGGGTAATGGTC 10823690 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || |||||||| || || Sbjct 10823691 TTGCCAGTGAGGGTCTTCACAAAGATCTG 10823719 Score = 136 bits (150), Expect = 9e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || |||| || |||||||| || ||||| || |||| |||||| || || | || | Sbjct 10823733 AGCCTCAACACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGCAAGTGTGCGG 10823792 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| || |||||||| ||||||||||| ||||||||||| ||||| ||| || || Sbjct 10823793 CCATCCTCGAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGATCCGGGGGAATGCCCTCC 10823852 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||||||||| ||| || |||| |||||| | | || || || | || Sbjct 10823853 TTATCCTGAATCTTGGCCTTGACATTATCGATGGTGTCGGAGCTCTCCACCTCAAGGGTA 10823912 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||||||||| || ||||| ||||| || Sbjct 10823913 ATAGTCTTACCCGTGAGGGTCTTCACGAAAATCTG 10823947 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || || ||||| |||| |||||| || |||| || | ||||| Sbjct 10823283 AGGACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGGCCATCC 10823342 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | ||||||||||||||| ||| || || ||| Sbjct 10823343 TCAAGCTGCTTCCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCCTCCTTGTCC 10823402 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| || | || || | | || || ||||| ||||||||| Sbjct 10823403 TGAATCTTAGCCTTCACATTATCAATAGTATCGGAGCTCTCAACCTCCAAGGTGATCGTC 10823462 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| ||||| Sbjct 10823463 TTGCCGGTGAGGGTCTTGACAAAGATTTG 10823491 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| || |||||||| |||| ||||||||| || | || | || || Sbjct 10824195 AGAACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 10824254 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| || |||||||||||||| ||| ||||| ||| Sbjct 10824255 TCGAGCTGCTTGCCGGCGAAGATAAGCCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCC 10824314 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || || | ||||| ||| Sbjct 10824315 TGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTC 10824374 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| |||||||| || || || Sbjct 10824375 TTGCCGGTGAGGGTTTTCACGAAGATCTG 10824403 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 ||||| ||||||||||| || || ||||| || | ||| ||||| || | || | || Sbjct 10823964 CTCAGCACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCTGCAAGGGTGCGGCCG 10824023 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 || || |||||||| || || ||||| | ||||||||||| ||| || || || Sbjct 10824024 TCCTCGAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTG 10824083 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 ||||| ||||| ||| ||| |||| |||||| | | || || || | ||||| Sbjct 10824084 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATG 10824143 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| |||||||||||||| || Sbjct 10824144 GTCTTGCCGGTGAGGGTTTTCACAAAAATCTG 10824175 >seq10 Length=13112115 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| ||||||||||| ||||| |||||||| |||| |||| || || Sbjct 3654509 AGCACCAGGTGGAGCGTCGACTCCTTCTGGACATTGTAGTCGGCCAGAGTCTGGCCGTCC 3654568 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||||||||| ||||||||||| ||| || || || ||| Sbjct 3654569 TCGAGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 3654628 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| | ||||| || | | || || || | ||||| ||| Sbjct 3654629 TGGATCTTCGACTTCACGTTGGCAACGGTATCAGAGCTCTCGACCTCGAGAGTGATGGTC 3654688 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || || || Sbjct 3654689 TTGCCGGTGAGGGTCTTCACGAAGATCTG 3654717 Score = 109 bits (120), Expect = 1e-18 Identities = 154/214 (72%), Gaps = 7/214 (3%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||||||||||||||| |||||| | | || Sbjct 3659293 AGGACGAGGTGGAGCGTCGACTCCTTCTGGACGTTGTAGTCAGACAAAGTGCGCTCGTCA 3659352 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGAC---GCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 || ||||| || || | |||||||| | |||| || |||| | ||| || || Sbjct 3659353 TCGAGCTGTTTGCCACCAAAGATGAGCCTTTGCTGATGATCCGAAGGAATGCCCTCCTTA 3659412 Query 199535 TCCTGAATCTTTTGCTTCACGGATT--CGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592 ||||| ||||| ||| || ||| | | |||||| | | || || || | || | Sbjct 3659413 TCCTGGATCTTGGCCTTAAC--ATTGGCAATGGTGTCAGAGTTGTCGACCTCAAGAGTAA 3659470 Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||| || ||||| || |||||||| || || Sbjct 3659471 TAGTCTTGCCAGTGAGGGTCTTCACAAAGATCTG 3659504 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || || || || |||||||| | |||||||| | || | Sbjct 3654272 CGAAGACGAAGCACGAGATGAAGGGTGGATTCCTTTTGAATATTGTAGTCCGATAAGCAC 3654331 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||| |||| ||||| || |||||||| || ||||||||||| ||| || || Sbjct 3654332 CGATCATCCTCCAATTGCTTCCCTGCGAAGATCAGCCGCTGCTGGTCAGGAGGGATGCCC 3654391 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATT--CGACGGTGTCTGTTGTTTCTACATCCA 199586 || ||||| ||||| |||||| ||| | |||||||| | | || || || | Sbjct 3654392 TCCTTGTCCTGGATCTTCGACTTCAC--ATTGGCAACGGTGTCGGAGCTCTCGACCTCGA 3654449 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || ||||| || || || Sbjct 3654450 GAGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAGATCTG 3654489 Score = 89.7 bits (98), Expect = 1e-12 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || |||| ||| |||| |||||| |||| ||||||||| |||| ||| | || Sbjct 3654736 CAGTACCAGGTAGAGCGTCGCCTCCTTCTGGATGTTGTAGTCGGCCAGAGTTAGGTCGTC 3654795 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAAT-TCCTTCTCGCT 199535 || |||||||| || |||||| ||| | ||||||||| ||| || ||| | || Sbjct 3654796 GTCGAGCTGCTTGCCACCGAAGACGAGCCTCTGCTGGTCAGGAGCAACGTCCACCGAGC- 3654854 Query 199536 CCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595 |||| | ||| ||||||| | | || || | | || || |||| ||||| | Sbjct 3654855 CCTGGAGCTTCGACTTCACGTTGGCAATTGTATCGGAGCTCTCGACCTCCAGAGTGATGG 3654914 Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAAT 199623 | | || ||||| || ||||||||||| Sbjct 3654915 ACATGCCGGTGAGGGTCTTCACAAAAAT 3654942 >seq12 Length=12612916 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| ||||||||||| |||| ||||||||| |||| ||| | || || Sbjct 12401226 AGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCGTCC 12401167 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| ||||||||||| ||||||||||||||||| || || || ||| Sbjct 12401166 TCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCC 12401107 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || ||| ||| || |||| |||||| | | || || || | ||||| ||| Sbjct 12401106 TGGATTTTTGCCTTAACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 12401047 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 12401046 TTGCCGGTCAGGGTCTTGACGAAGATCTG 12401018 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || |||||||| || || ||||| |||| ||||||||| |||| ||| Sbjct 12401463 CGAAGGCGGAGAACCAGGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCCGCCAGAGTG 12401404 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || |||| |||||| |||||||||||||| |||||||||||||| || || Sbjct 12401403 CGGCCGTCCTCCAACTGCTTACCGGCGAAGATGAGCCGCTGCTGGTCCGGTGGGATGCCC 12401344 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || ||| |||| ||||| | | || || || | Sbjct 12401343 TCCTTGTCCTGGATCTTAGCTTTGACGTTGTCGATCGTGTCGGAGCTCTCCACCTCGAGG 12401284 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || || ||||| || || || Sbjct 12401283 GTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTG 12401246 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| ||||||||| || | |||| || || Sbjct 12400770 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTCCGGCCGTCC 12400711 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| ||||||||||| | ||||||||||||||| || || || ||| Sbjct 12400710 TCCAACTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGAGGGATCCCCTCCTTGTCC 12400651 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| || |||| |||||| | | || || || | ||||| ||| Sbjct 12400650 TGGATTTTGGCCTTAACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 12400591 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || ||||| Sbjct 12400590 TTGCCAGTCAGGGTCTTGACGAAGATTTG 12400562 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| ||||||||||| |||| ||||||||| || | ||||| || || Sbjct 12400998 AGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTCCGACCGTCC 12400939 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| ||||||||||| | |||||||||||||| || || || ||| Sbjct 12400938 TCCAACTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCC 12400879 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| || |||| |||||| | | || || || | ||||| ||| Sbjct 12400878 TGGATTTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 12400819 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 12400818 TTGCCGGTCAGGGTCTTGACGAAGATCTG 12400790 >seq3 Length=16781886 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || ||||||||||||| |||||| || | || |||| ||||| |||| ||| Sbjct 16131914 TGAAGGGTGGACTCCTTTTGGATGTTGTACTCTGATAAGGTCCGGCCATCCTCCAATTGC 16131855 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || || ||||| |||||||| || |||| ||||||||| || ||||| || Sbjct 16131854 TTCCCAGCAAATATGAGCCGCTGCTGATCGGGAAGGATTCCTTCTTTGTCTTGAATTTTA 16131795 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||||| | ||| | ||||| | | || || || | ||||| ||||| || ||| Sbjct 16131794 CCCTTCAGGTTTTCAATTGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTTCCAGTG 16131735 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || || ||||||||||| || Sbjct 16131734 AGGGTCTTCACAAAAATCTG 16131715 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || ||||||||||||| |||||| || | || |||| ||||| |||| ||| Sbjct 16199718 TGAAGGGTGGACTCCTTTTGGATGTTGTACTCTGATAAGGTCCGGCCATCCTCCAATTGC 16199659 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || || ||||| |||||||| || |||| ||||||||| || ||||| || Sbjct 16199658 TTCCCAGCAAATATGAGCCGCTGCTGATCGGGAAGGATTCCTTCTTTGTCTTGAATTTTA 16199599 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||||| | ||| | ||||| | | || || || | ||||| ||||| || ||| Sbjct 16199598 CCCTTCAGGTTTTCAATTGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTTCCAGTG 16199539 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || || ||||||||||| || Sbjct 16199538 AGGGTCTTCACAAAAATCTG 16199519 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || ||||||||||||| |||||| || | | || | || || Sbjct 16131239 AGGACGAGGTGGAGGGTTGACTCCTTTTGGATGTTGTACTCTGAGAGTGTGCGGCCGTCC 16131180 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || || || ||||| || | ||||||||||||| ||| || || ||| Sbjct 16131179 TCGAGTTGTTTACCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 16131120 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| ||| | ||||| | | || || ||||| ||||| ||| Sbjct 16131119 TGGATCTTCGACTTCACATTTTCAATTGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTC 16131060 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| ||||| || || || Sbjct 16131059 TTGCCGGTGAGAGTCTTCACGAAGATCTG 16131031 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || ||||||||||||| |||||| || | | || | || || Sbjct 16199043 AGGACGAGGTGGAGGGTTGACTCCTTTTGGATGTTGTACTCTGAGAGTGTGCGGCCGTCC 16198984 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || || || ||||| || | ||||||||||||| ||| || || ||| Sbjct 16198983 TCGAGTTGTTTACCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 16198924 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| ||| | ||||| | | || || ||||| ||||| ||| Sbjct 16198923 TGGATCTTCGACTTCACATTTTCAATTGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTC 16198864 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| ||||| || || || Sbjct 16198863 TTGCCGGTGAGAGTCTTCACGAAGATCTG 16198835 Score = 111 bits (122), Expect = 4e-19 Identities = 158/222 (71%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||| || ||||| |||||||| || || || ||||| | ||| || Sbjct 16132160 CGAAGGCGCAGGACAAGATGAAGAGTAGACTCCTTCTGAACATTATAGTCCGACAAGGTG 16132101 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCC----GGAAAAAT 199524 | |||||| | |||||| || || || |||||||| | |||||| | ||| | Sbjct 16132100 CGTCCATCCTGCAGCTGTTTCCCAGCAAAGATGAGCCTCTGCTGAAACCAGGGGATACCC 16132041 Query 199525 TCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATC 199584 ||||| || ||||||||| | || || ||| |||||||| | | || || || Sbjct 16132040 TCCTTATC----CTGAATCTTGTATTTGACATTTTCTACGGTGTCCGAGCTCTCCACCTC 16131985 Query 199585 CAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||| |||| || || | ||| ||||||||||| || Sbjct 16131984 GAGAGTGATGCTCTTCCCAGTTACAGTCTTCACAAAAATCTG 16131943 Score = 111 bits (122), Expect = 4e-19 Identities = 158/222 (71%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||| || ||||| |||||||| || || || ||||| | ||| || Sbjct 16199964 CGAAGGCGCAGGACAAGATGAAGAGTAGACTCCTTCTGAACATTATAGTCCGACAAGGTG 16199905 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCC----GGAAAAAT 199524 | |||||| | |||||| || || || |||||||| | |||||| | ||| | Sbjct 16199904 CGTCCATCCTGCAGCTGTTTCCCAGCAAAGATGAGCCTCTGCTGAAACCAGGGGATACCC 16199845 Query 199525 TCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATC 199584 ||||| || ||||||||| | || || ||| |||||||| | | || || || Sbjct 16199844 TCCTTATC----CTGAATCTTGTATTTGACATTTTCTACGGTGTCCGAGCTCTCCACCTC 16199789 Query 199585 CAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||| |||| || || | ||| ||||||||||| || Sbjct 16199788 GAGAGTGATGCTCTTCCCAGTTACAGTCTTCACAAAAATCTG 16199747 >seq1443 Length=10899 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || || ||||| |||| ||||||||| |||| ||| | || || Sbjct 7967 AGGACGAGGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCGTCC 8026 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| ||||| |||||||| |||||||||||||| || || || ||| Sbjct 8027 TCCAACTGCTTACCGGCAAAGATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 8086 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || ||| |||| ||||| | | || || || | ||||| ||| Sbjct 8087 TGGATCTTAGCTTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 8146 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 8147 TTGCCGGTCAGGGTCTTCACGAAGATCTG 8175 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| || | ||| | || || Sbjct 8423 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCGTCC 8482 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| ||||||||||| | |||||||||||||| || || || ||| Sbjct 8483 TCCAACTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCC 8542 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| || |||| |||||| | | || || || | ||||| ||| Sbjct 8543 TGGATTTTGGCCTTGACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 8602 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || ||||| Sbjct 8603 TTGCCGGTCAGGGTCTTGACGAAGATTTG 8631 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| ||||||||||| |||| ||||||||| || | ||| | || || Sbjct 8195 AGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGAGTGCGGCCGTCC 8254 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || |||||||| ||||||||||||||||| || || || ||| Sbjct 8255 TCCAACTGCTTGCCTGCGAAGATCAGACGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCC 8314 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| || |||| |||||| | | || || || | ||||| ||| Sbjct 8315 TGGATTTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 8374 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 8375 TTGCCGGTCAGGGTCTTGACGAAGATCTG 8403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178874336664643