Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 2e-11 >seq7 Length=14728688 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 ||||| || | ||| || || | ||| | ||| ||| ||||| || || || ||||| Sbjct 13849653 CCGCCGCGGAGACGGAGGACAAGATGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCG 13849594 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | ||| | || || | || |||||| | || || | |||||||||||||| ||| Sbjct 13849593 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 13849534 Query 39613 ACGCCTTCTTTGTC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | || || ||||| | || || | || |||| | ||||| | ||| |||| Sbjct 13849533 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCG--ATGGTGTCGGAGCTCTCCA 13849476 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || | || || || || ||||||| ||||| |||||||||||||| Sbjct 13849475 CCTCAAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 13849427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347356353168857