Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq8 118 7e-22 seq1443 113 3e-20 seq2 107 1e-18 seq4 102 5e-17 seq12 100 2e-16 seq3 100 2e-16 seq7 95.1 8e-15 seq13 93.3 3e-14 seq10 91.5 1e-13 >seq8 Length=13970067 Score = 118 bits (130), Expect = 7e-22 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || |||||||| | | ||| | ||| | ||| || || |||||||||||||| | | Sbjct 10823496 CCGCCCCTCAAACGAAGAACAAGGTGGAGGGTGGACTCCTTTTGAATGTTATAGTCGGCA 10823555 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| || ||||| || || || || || || || |||||||| | || Sbjct 10823556 AGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 10823615 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTC 34930 | ||||||||||| ||||||| ||| || | |||| || | ||| || || Sbjct 10823616 ATGCCCTCCTTGTCCTGAATCTTCGCTTTCAC----GTTATCAATGGTGTCCGAGCTTTC 10823671 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || | ||| ||||| || || ||||| |||||||||||||||||||| Sbjct 10823672 AACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 10823722 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||| ||||||| || | ||| | ||| ||| ||||||||||||||||| | | Sbjct 10823952 CCACCCCTTAACCTCAGCACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCTGCA 10824011 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || | || || ||||| || || ||||| || | || |||||||| | || Sbjct 10824012 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGG 10824071 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| |||||| | || | || | ||| || Sbjct 10824072 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACC 10824131 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | ||| ||||| || || ||||| || |||||||| |||||||| Sbjct 10824132 TCAAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACAAAAATCTGCAT 10824178 Score = 89.7 bits (98), Expect = 3e-13 Identities = 146/208 (70%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| ||| ||||| ||||| || |||| ||| | || |||| || ||||| Sbjct 10823291 GTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGGCCATCCTCAAGCTG 10823350 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || | || |||||||| |||| | |||||||||||| |||||| Sbjct 10823351 CTTCCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCCTCCTTGTCCTGAATCTT 10823410 Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 || || || |||| || || | |||||| || | ||| || || || | Sbjct 10823411 AGCCTTCAC--AT--TATCAATAGTATCGGAGCTCTCAACCTCCAAGGTGATCGTCTTGC 10823466 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| ||||| |||||||| ||||| Sbjct 10823467 CGGTGAGGGTCTTGACAAAGATTTGCAT 10823494 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||| | | | ||| | ||| | ||| || ||||| ||||| ||||| | Sbjct 10824180 CCTCCCCTTAGGCGAAGAACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 10824239 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || | || || ||||| || ||||| || || || || |||||||| | || Sbjct 10824240 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGCCGCTGCTGGTCCGGGGGA 10824299 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | || |||||||| ||||| ||||| || | ||||| ||| | ||| Sbjct 10824300 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCAGAGCTCTC 10824355 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | ||| ||||| || || ||||| || ||||| ||||||||||| Sbjct 10824356 CACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 10824406 >seq1443 Length=10899 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||||| || | || | || |||| ||| || |||||||| Sbjct 7987 TTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCGTCCTCCAACTGCTTACCGGCAAA 8046 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| |||| | ||||||||||| ||||| ||||||| Sbjct 8047 GATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTAGCTTTGACGTT 8106 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| || || ||| || |||| ||| ||||| || || || || |||||||| Sbjct 8107 GTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 8166 Query 34970 AAAGATCTGCAT 34981 ||||||||||| Sbjct 8167 GAAGATCTGCAT 8178 Score = 84.2 bits (92), Expect = 1e-11 Identities = 137/195 (70%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| ||| | || | || |||| ||| || || || || Sbjct 8216 TCCTTCTGGATGTTGTAGTCCGCAAGAGTGCGGCCGTCCTCCAACTGCTTGCCTGCGAAG 8275 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||||||| || || ||||| || Sbjct 8276 ATCAGACGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATTTTGGCCTTGAC--AT 8333 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || || ||| || |||| ||| ||||| || || || || ||||| Sbjct 8334 --TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTT 8391 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 8392 GACGAAGATCTGCAT 8406 >seq2 Length=17334668 Score = 107 bits (118), Expect = 1e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||| | ||||||||||||||||| || ||| ||||||||||| ||||| | Sbjct 1903448 CCACCCCTGAGCCTCAAAACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGCT 1903507 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | | || |||| |||| |||||| || |||||||| |||| |||||||||| | || Sbjct 1903508 AAGGTGCGGCCATCTTCCAACTGTTTCCCAGCAAATATAAGTCTTTGCTGGTCTGGGGGT 1903567 Query 34875 ACCCCCTCCTTGTC 34888 | |||||||| || Sbjct 1903568 ATGCCCTCCTTATC 1903581 >seq4 Length=15584765 Score = 102 bits (112), Expect = 5e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| |||| |||| || ||||| || ||||| || Sbjct 384498 TCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGCCCATCCTCGAGCTGCTTCCCGGCGAAG 384439 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||| |||||||| ||||| || || Sbjct 384438 ATGAGGCGCTGCTGATCGGGGGGGATCCCTTCCTTGTCCTGGATCTTTGCCTTCACATTG 384379 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || || | ||| || || || |||||||| ||||||||| Sbjct 384378 TCGATCGTGTCCGAGGACTCCACCTCAAGGGTGATTGTCTTCCCCGTGAGGGTCTTCACA 384319 Query 34971 AAGATCTGCATATTCG 34986 ||||||||||| |||| Sbjct 384318 AAGATCTGCATCTTCG 384303 >seq12 Length=12612916 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||| ||| | || ||| ||||| ||||| ||||||| || | || | || || Sbjct 12401452 AACCAGGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCGTCCTC 12401393 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||| || ||||| || || || || |||||||| | || | ||||||||||| Sbjct 12401392 CAACTGCTTACCGGCGAAGATGAGCCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 12401333 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| ||||||| | |||| || | ||| || |||| ||| ||||| || Sbjct 12401332 GATCTTAGCTTTGACGTTGTCGATCGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTCTT 12401273 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||| ||||||||||| Sbjct 12401272 GCCGGTCAGGGTCTTCACGAAGATCTGCAT 12401243 >seq3 Length=16781886 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||||| || |||||||| || | | | || || || ||||| || ||||| Sbjct 16131447 TTCTTTCTGAACATTGTAGTCCGACAGAGTGTGACCGTCCTCGAGTTGTTTGCCTGCAAA 16131388 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || | |||||| || || | ||||||||||| ||||| |||||| Sbjct 16131387 GATGAGCCTTTGCTGATCCGAGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 16131328 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | |||| || | |||||| || | ||| ||||| ||||| ||||||||||| || Sbjct 16131327 TTCGATCGTGTCGGAGCTCTCAACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTTAC 16131268 Query 34970 AAAGATCTGCATA 34982 |||||| |||||| Sbjct 16131267 AAAGATTTGCATA 16131255 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||||| || ||||| || || | | | || || || ||||| || ||||| Sbjct 16199251 TTCTTTCTGAACATTGTAGTCTGACAGAGTGTGACCGTCCTCGAGTTGTTTGCCTGCAAA 16199192 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || | |||||| || || | ||||||||||| ||||| |||||| Sbjct 16199191 GATGAGCCTTTGCTGATCCGAGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 16199132 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | |||| || | |||||| || | ||| ||||| ||||| ||||||||||| || Sbjct 16199131 TTCGATCGTGTCGGAGCTCTCAACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTTAC 16199072 Query 34970 AAAGATCTGCATA 34982 |||||| |||||| Sbjct 16199071 AAAGATTTGCATA 16199059 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||| ||||||||||| | | | ||| |||| | ||||||||| || ||||| Sbjct 16132130 TCCTTCTGAACATTATAGTCCGACAAGGTGCGTCCATCCTGCAGCTGTTTCCCAGCAAAG 16132071 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||| || | |||||||| || |||||| | |||||| | Sbjct 16132070 ATGAGCCTCTGCTGAAACCAGGGGATACCCTCCTTATCCTGAATCTTGTATTTGACATTT 16132011 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 ||| | || | ||| || |||| || ||| | || || || | |||||||||| Sbjct 16132010 TCTACGGTGTCCGAGCTCTCCACCTCGAGAGTGATGCTCTTCCCAGTTACAGTCTTCACA 16131951 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 16131950 AAAATCTGCAT 16131940 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||| ||||||||||| | | | ||| |||| | ||||||||| || ||||| Sbjct 16199934 TCCTTCTGAACATTATAGTCCGACAAGGTGCGTCCATCCTGCAGCTGTTTCCCAGCAAAG 16199875 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||| || | |||||||| || |||||| | |||||| | Sbjct 16199874 ATGAGCCTCTGCTGAAACCAGGGGATACCCTCCTTATCCTGAATCTTGTATTTGACATTT 16199815 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 ||| | || | ||| || |||| || ||| | || || || | |||||||||| Sbjct 16199814 TCTACGGTGTCCGAGCTCTCCACCTCGAGAGTGATGCTCTTCCCAGTTACAGTCTTCACA 16199755 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 16199754 AAAATCTGCAT 16199744 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| |||| ||| || || || ||||| || || || | | | || |||| || Sbjct 16131921 AACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTACTCTGATAAGGTCCGGCCATCCTC 16131862 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || || || |||||||| || || ||||| || | | | || || ||||| Sbjct 16131861 CAATTGCTTCCCAGCAAATATGAGCCGCTGCTGATCGGGAAGGATTCCTTCTTTGTCTTG 16131802 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||| || || | | | | || | ||| | |||||| |||| || ||||| || Sbjct 16131801 AATTTTACCCTTCAGGTTTTCAATTGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTT 16131742 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| ||||| ||||||||||| |||||||| Sbjct 16131741 TCCAGTGAGGGTCTTCACAAAAATCTGCAT 16131712 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| |||| ||| || || || ||||| || || || | | | || |||| || Sbjct 16199725 AACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTACTCTGATAAGGTCCGGCCATCCTC 16199666 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || || || |||||||| || || ||||| || | | | || || ||||| Sbjct 16199665 CAATTGCTTCCCAGCAAATATGAGCCGCTGCTGATCGGGAAGGATTCCTTCTTTGTCTTG 16199606 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||| || || | | | | || | ||| | |||||| |||| || ||||| || Sbjct 16199605 AATTTTACCCTTCAGGTTTTCAATTGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTT 16199546 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| ||||| ||||||||||| |||||||| Sbjct 16199545 TCCAGTGAGGGTCTTCACAAAAATCTGCAT 16199516 >seq7 Length=14728688 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| ||| ||||| ||||| ||||| | ||| | || | || || ||||| Sbjct 13850314 GTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTG 13850255 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || ||||| || || || |||||||| | || | |||||||||||| ||||| Sbjct 13850254 CTTACCTGCAAAGATCAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGGATCTT 13850195 Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 | ||||| || | ||||| || | ||| || |||| ||| || || || | Sbjct 13850194 CGCCTTGAC--AT--TGTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTGC 13850139 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| ||||| || ||||||||||| Sbjct 13850138 CGGTGAGGGTCTTGACGAAGATCTGCAT 13850111 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| |||| | || || ||||| || ||||| || Sbjct 13849389 TCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCGAGCTGCTTCCCGGCGAAG 13849330 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | |||||||||||| ||||| || ||| Sbjct 13849329 ATGAGCCGCTGCTGATCCGGGGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTG 13849270 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| ||| || || ||||| ||||| || ||||| Sbjct 13849269 TCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATCGTCTTTCCGGTGAGGGTTTTCACG 13849210 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 13849209 AAGATCTGCAT 13849199 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| | ||| | ||| | || || ||||| || ||||| || Sbjct 13850074 TTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTCCCGGCGAA 13850015 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | ||||||||||| ||||| || ||| Sbjct 13850014 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 13849955 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || | ||| || |||| ||| || || || ||||| || ||||| || Sbjct 13849954 GTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTCTTGAC 13849895 Query 34970 AAAGATCTGCAT 34981 ||||||||||| Sbjct 13849894 GAAGATCTGCAT 13849883 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||||| ||| | || | ||| | ||| ||| || || ||||| ||||| | Sbjct 13849881 CCACCCCTCAGCCTGAGCACGAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCG 13849822 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || | || || ||||| || |||||||| || || | ||||||||| | || Sbjct 13849821 AGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCAAAGATGAGCCTTTGCTGGTCCGGGGGG 13849762 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||| ||||| ||||| || ||| | || | || | ||| || Sbjct 13849761 ATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCGACC 13849702 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| ||| || || || ||||| || || || || |||||||||||| Sbjct 13849701 TCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCATA 13849654 >seq13 Length=11759267 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| ||| ||| | || || ||||| || || || || Sbjct 11348150 TCCTTCTGGATGTTGTAGTCCGCTAGGGTTCTCCCGTCCTCGAGCTGCTTCCCCGCGAAG 11348091 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | |||||||||||| |||||| || ||| Sbjct 11348090 ATGAGGCGCTGCTGATCCGGGGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 11348031 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || || | ||| || || || ||||| || || ||||| Sbjct 11348030 TCGATCGTGTCCGAGGACTCCACCTCCAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACG 11347971 Query 34971 AAGATCTGCATATTCG 34986 ||||||||||| |||| Sbjct 11347970 AAGATCTGCATCTTCG 11347955 >seq10 Length=13112115 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 34779 TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGT 34838 |||| ||| ||| || ||||| || |||||||| | || || ||||| |||| || Sbjct 3654290 TGAAGGGTGGATTCCTTTTGAATATTGTAGTCCGATAAGCACCGATCATCCTCCAATTGC 3654349 Query 34839 TTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTC 34898 || || || || || || || |||||||| | || | ||||||||||| |||||| Sbjct 3654350 TTCCCTGCGAAGATCAGCCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTC 3654409 Query 34899 TGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTG 34958 || || || | | || | ||| || |||| || ||||| ||||| ||| Sbjct 3654410 GACTTCACATTGGCAACGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTTCCGGTG 3654469 Query 34959 AGAGTCTTCACAAAGATCTGCAT 34981 || |||||||| ||||||||||| Sbjct 3654470 AGGGTCTTCACGAAGATCTGCAT 3654492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324621220199112