Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq3129 594 2e-165 seq3033 594 2e-165 seq559 518 1e-142 seq488 518 1e-142 seq18 132 1e-26 seq7 125 2e-24 seq13 102 2e-17 seq5 96.9 1e-15 seq6 87.8 5e-13 >seq3129 Length=159636 Score = 594 bits (658), Expect = 2e-165 Identities = 729/993 (73%), Gaps = 2/993 (0%) Strand=Plus/Plus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||| ||||| || || ||||||||||||||||| ||||| ||||||||||||||| Sbjct 93 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATA 152 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCA 5305 |||||||| ||||| || | || ||| ||||||||| || | | ||| | |||| Sbjct 153 CCAAGGTTAGCACGATTGATGATATCAGCCCAAGTGTTAATAACACGACCCTGACTGTCA 212 Query 5306 ACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATA 5365 || ||||| || ||||| || || || || || || ||||||||||| || || | | Sbjct 213 ACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAA 272 Query 5366 GAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTA 5425 || || | ||| || | || || ||||||| ||||| ||||||||||||| ||| | Sbjct 273 GAAGTGAACCAGATACCTACTACAGGCCAAGCAGCCAAGAAGAAATGTAAAGAACGAGAA 332 Query 5426 TTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 5485 ||||| || |||||||| |||||||| | || ||||| || |||||||| || ||||| Sbjct 333 TTGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCTACAATA 392 Query 5486 TTATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTT 5545 ||||| |||||| ||||||| |||||| | || || | || ||| |||| Sbjct 393 TTATAAGTTTCTCCCTCTTGACCGAATCTGTAACCTTCATTAGCAGACTCGTTTTCAGTG 452 Query 5546 GTTTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCA 5605 ||||| | || | ||| || || | |||||||||||| ||| | | || Sbjct 453 GTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCG 512 Query 5606 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCC 5665 |||||||| ||||| ||||| | |||||| || |||||||||||||| ||||| |||||| Sbjct 513 CCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCTGCC 572 Query 5666 TGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA 5725 |||||||| | ||||||||| |||||||||||||| || | ||||||||||||| |||| Sbjct 573 TGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAGAAA 632 Query 5726 CTTCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGA 5784 ||||| || || | |||||| | || || || | |||| || || ||||| || ||||| Sbjct 633 CTTCCTTGACCAATAGGGTAGATCAAGAAAACAGCAGTA-GCAGCTGCAACAGGAGCTGA 691 Query 5785 ATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCC 5844 |||||| || |||||| || ||||| || | | | ||||||||||||| | || || Sbjct 692 ATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 751 Query 5845 CAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATT 5904 || |||| || | ||||| | |||||| | || | || | || || || ||||| Sbjct 752 CATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATT 811 Query 5905 GTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGC 5964 ||| | ||| ||||| | | |||||||||||||| || || || || || || || || Sbjct 812 GTATAACCACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGCAAACCTATAGC 871 Query 5965 GTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGC 6024 || | || | || ||| || || || || ||||||||||| |||| ||| || | Sbjct 872 TGCAGAAGTCGGAATAATGGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGA 931 Query 6025 GACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAA 6084 || ||||| || || || || || || ||||| || ||||| | ||| || | ||||| Sbjct 932 AACAGGTTCGCGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAA 991 Query 6085 TGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAG 6144 | ||| ||||||||| || | | || ||||| || ||||| ||||| || | || || Sbjct 992 TACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCAATGTAAAG 1051 Query 6145 GCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || || | ||||| || | ||||| ||||| Sbjct 1052 ACGATTTTCAGTGCTGGTTATCCAGTTGCAGAA 1084 >seq3033 Length=62413 Score = 594 bits (658), Expect = 2e-165 Identities = 729/993 (73%), Gaps = 2/993 (0%) Strand=Plus/Plus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||| ||||| || || ||||||||||||||||| ||||| ||||||||||||||| Sbjct 52642 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATA 52701 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCA 5305 |||||||| ||||| || | || ||| ||||||||| || | | ||| | |||| Sbjct 52702 CCAAGGTTAGCACGATTGATGATATCAGCCCAAGTGTTAATAACACGACCCTGACTGTCA 52761 Query 5306 ACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATA 5365 || ||||| || ||||| || || || || || || ||||||||||| || || | | Sbjct 52762 ACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAA 52821 Query 5366 GAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTA 5425 || || | ||| || | || || ||||||| ||||| ||||||||||||| ||| | Sbjct 52822 GAAGTGAACCAGATACCTACTACAGGCCAAGCAGCCAAGAAGAAATGTAAAGAACGAGAA 52881 Query 5426 TTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 5485 ||||| || |||||||| |||||||| | || ||||| || |||||||| || ||||| Sbjct 52882 TTGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCTACAATA 52941 Query 5486 TTATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTT 5545 ||||| |||||| ||||||| |||||| | || || | || ||| |||| Sbjct 52942 TTATAAGTTTCTCCCTCTTGACCGAATCTGTAACCTTCATTAGCAGACTCGTTTTCAGTG 53001 Query 5546 GTTTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCA 5605 ||||| | || | ||| || || | |||||||||||| ||| | | || Sbjct 53002 GTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCG 53061 Query 5606 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCC 5665 |||||||| ||||| ||||| | |||||| || |||||||||||||| ||||| |||||| Sbjct 53062 CCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCTGCC 53121 Query 5666 TGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA 5725 |||||||| | ||||||||| |||||||||||||| || | ||||||||||||| |||| Sbjct 53122 TGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAGAAA 53181 Query 5726 CTTCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGA 5784 ||||| || || | |||||| | || || || | |||| || || ||||| || ||||| Sbjct 53182 CTTCCTTGACCAATAGGGTAGATCAAGAAAACAGCAGTA-GCAGCTGCAACAGGAGCTGA 53240 Query 5785 ATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCC 5844 |||||| || |||||| || ||||| || | | | ||||||||||||| | || || Sbjct 53241 ATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 53300 Query 5845 CAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATT 5904 || |||| || | ||||| | |||||| | || | || | || || || ||||| Sbjct 53301 CATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATT 53360 Query 5905 GTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGC 5964 ||| | ||| ||||| | | |||||||||||||| || || || || || || || || Sbjct 53361 GTATAACCACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGCAAACCTATAGC 53420 Query 5965 GTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGC 6024 || | || | || ||| || || || || ||||||||||| |||| ||| || | Sbjct 53421 TGCAGAAGTCGGAATAATGGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGA 53480 Query 6025 GACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAA 6084 || ||||| || || || || || || ||||| || ||||| | ||| || | ||||| Sbjct 53481 AACAGGTTCGCGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAA 53540 Query 6085 TGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAG 6144 | ||| ||||||||| || | | || ||||| || ||||| ||||| || | || || Sbjct 53541 TACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCAATGTAAAG 53600 Query 6145 GCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || || | ||||| || | ||||| ||||| Sbjct 53601 ACGATTTTCAGTGCTGGTTATCCAGTTGCAGAA 53633 >seq559 Length=26669 Score = 518 bits (574), Expect = 1e-142 Identities = 707/984 (72%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 5195 GCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTG 5254 |||| || || ||||| || |||||||| ||||| ||||| ||||||||||||||||| Sbjct 22385 GCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 22444 Query 5255 GCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGAC 5314 ||||| || | | ||| ||||| || || | | ||| | ||||| || || Sbjct 22445 GCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 22504 Query 5315 TGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGC 5374 || ||||| || || || || | || |||||||||||| ||| || | || ||| | | Sbjct 22505 TGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGTGAAC 22564 Query 5375 CATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAG 5434 || || | || || ||||||| || ||||||||||||||| ||| |||||| || Sbjct 22565 CAGATACCTACTACAGGCCAAGCCGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAAA 22624 Query 5435 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTT 5494 |||||||| ||||| || | || ||||| || |||||||| || || || ||||| ||| Sbjct 22625 CTAGCATATTGGAAAATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTT 22684 Query 5495 TCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGA 5554 ||||||||||| |||||| | || || | ||| ||| | | || ||||| | Sbjct 22685 TCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTCCCTG 22744 Query 5555 ATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATACC 5614 || | |||||| || | |||||||||||| ||| | || || |||||||| Sbjct 22745 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGAGAACCGCCGAATACA 22804 Query 5615 CCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACG 5674 ||||| ||||| | |||||| || || ||||||||||| ||||| || ||||||||||| Sbjct 22805 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACA 22864 Query 5675 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCTGT 5734 | ||| ||||| ||||||||||| || || ||||||||||| ||| || ||||| || Sbjct 22865 ATCATGAAGTTGAAAGTACCAGAAATCCCTAGAGGCATACCGTCAGAAAAGCTTCCTTGA 22924 Query 5735 CCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGCTAC 5793 || | || |||| || || || | ||| || || ||||| || ||||||||||| || Sbjct 22925 CCAATGGGATATATCAAGAAAACGGCAGT-TGCAGCAGCAACTGGAGCTGAATATGCAAC 22983 Query 5794 GCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAGC 5853 |||||| || ||||| || | | | ||||||||||||| | || |||| ||| Sbjct 22984 AGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACA 23043 Query 5854 TGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCA 5913 || | ||||| | |||||| | || | || | || || || |||||||| | ||| Sbjct 23044 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACCA 23103 Query 5914 TTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCT 5973 |||||| | || |||||||| || || || ||||| || || || || || | Sbjct 23104 TTCATCAACGGAAGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAGAAGT 23163 Query 5974 GGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTC 6033 || | || ||| || || || || || ||||| || ||||||||||| | || ||||| Sbjct 23164 AGGAATAATGGCACCAGAAATAATATTATTTCCGTAAAGTAGAGATCCAGAAACAGGTTC 23223 Query 6034 ACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGT 6093 ||| || || || || || || || || ||||| | ||| || | |||||| ||| ||| Sbjct 23224 ACGAATACCATCAATATCCACCGGAGGAGCAGCAATGAAAGCAATAATAAATACAGAAGT 23283 Query 6094 TGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTT 6153 |||||| || | | || ||||| || || |||||||| || | || || ||||| | Sbjct 23284 TGCGGTCAATAAGGTAGGGATCATCAAAACGCCAAACCATCCAATGTAAAGACGGTTTTC 23343 Query 6154 GGTGCTAGTAACCCAGTCACAGAA 6177 ||||| || | ||||| |||||| Sbjct 23344 AGTGCTGGTTATCCAGTTACAGAA 23367 >seq488 Length=28536 Score = 518 bits (574), Expect = 1e-142 Identities = 707/984 (72%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 5195 GCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTG 5254 |||| || || ||||| || |||||||| ||||| ||||| ||||||||||||||||| Sbjct 22440 GCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 22499 Query 5255 GCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGAC 5314 ||||| || | | ||| ||||| || || | | ||| | ||||| || || Sbjct 22500 GCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 22559 Query 5315 TGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGC 5374 || ||||| || || || || | || |||||||||||| ||| || | || ||| | | Sbjct 22560 TGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGTGAAC 22619 Query 5375 CATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAG 5434 || || | || || ||||||| || ||||||||||||||| ||| |||||| || Sbjct 22620 CAGATACCTACTACAGGCCAAGCCGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAAA 22679 Query 5435 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTT 5494 |||||||| ||||| || | || ||||| || |||||||| || || || ||||| ||| Sbjct 22680 CTAGCATATTGGAAAATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTT 22739 Query 5495 TCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGA 5554 ||||||||||| |||||| | || || | ||| ||| | | || ||||| | Sbjct 22740 TCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTCCCTG 22799 Query 5555 ATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATACC 5614 || | |||||| || | |||||||||||| ||| | || || |||||||| Sbjct 22800 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGAGAACCGCCGAATACA 22859 Query 5615 CCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACG 5674 ||||| ||||| | |||||| || || ||||||||||| ||||| || ||||||||||| Sbjct 22860 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACA 22919 Query 5675 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCTGT 5734 | ||| ||||| ||||||||||| || || ||||||||||| ||| || ||||| || Sbjct 22920 ATCATGAAGTTGAAAGTACCAGAAATCCCTAGAGGCATACCGTCAGAAAAGCTTCCTTGA 22979 Query 5735 CCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGCTAC 5793 || | || |||| || || || | ||| || || ||||| || ||||||||||| || Sbjct 22980 CCAATGGGATATATCAAGAAAACGGCAGT-TGCAGCAGCAACTGGAGCTGAATATGCAAC 23038 Query 5794 GCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAGC 5853 |||||| || ||||| || | | | ||||||||||||| | || |||| ||| Sbjct 23039 AGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACA 23098 Query 5854 TGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCA 5913 || | ||||| | |||||| | || | || | || || || |||||||| | ||| Sbjct 23099 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACCA 23158 Query 5914 TTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCT 5973 |||||| | || |||||||| || || || ||||| || || || || || | Sbjct 23159 TTCATCAACGGAAGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAGAAGT 23218 Query 5974 GGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTC 6033 || | || ||| || || || || || ||||| || ||||||||||| | || ||||| Sbjct 23219 AGGAATAATGGCACCAGAAATAATATTATTTCCGTAAAGTAGAGATCCAGAAACAGGTTC 23278 Query 6034 ACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGT 6093 ||| || || || || || || || || ||||| | ||| || | |||||| ||| ||| Sbjct 23279 ACGAATACCATCAATATCCACCGGAGGAGCAGCAATGAAAGCAATAATAAATACAGAAGT 23338 Query 6094 TGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTT 6153 |||||| || | | || ||||| || || |||||||| || | || || ||||| | Sbjct 23339 TGCGGTCAATAAGGTAGGGATCATCAAAACGCCAAACCATCCAATGTAAAGACGGTTTTC 23398 Query 6154 GGTGCTAGTAACCCAGTCACAGAA 6177 ||||| || | ||||| |||||| Sbjct 23399 AGTGCTGGTTATCCAGTTACAGAA 23422 >seq18 Length=10911977 Score = 132 bits (146), Expect = 1e-26 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 5579 CCATGCATAGCAGCGAACAAAGCTCCACCGAATACCCCAGCAACACCGAGCATGTGGAAC 5638 |||||||||||| ||| | | || |||||||| ||||| ||||| | |||| | || Sbjct 6706347 CCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACACCTAACATGAGAAAT 6706406 Query 5639 GGATGCATAAGGATATTGTGTTCTGCCTGGAATACGAACATAAAGTTAAAAGTACCAGAG 5698 ||||| || |||||||||||| | | |||||||| | ||||||||| ||||||| |||| Sbjct 6706407 AGATGCGTATGGATATTGTGTTTTACTTGGAATACAATCATAAAGTTGAAAGTACTAGAG 6706466 Query 5699 ATACCAAGAGGCATACCATCACTGAAACTTCCCTGTCC 5736 || || | ||||||||||| | ||||||| | || || Sbjct 6706467 ATTCCTAAAGGCATACCATGAGAGAAACTTTCTTGGCC 6706504 Score = 93.3 bits (102), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 19/182 (10%) Strand=Plus/Plus Query 5606 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGT------ 5659 || ||||| ||||| ||||| | |||||| || ||||||||||||| ||||| Sbjct 421089 CCAAATACACCAGCTACACCTAACATGTGAAATTGATGCATAAGGATGTTGTGCACTTGT 421148 Query 5660 --TCTGCCTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCAT 5717 |||||||||||||| | ||||||||| ||||||| |||||| || | || Sbjct 421149 GCTCTGCCTGGAATACAATCATAAAGTTGAAAGTACTAGAGATTCCTAAAG--------- 421199 Query 5718 CACTGAAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACC 5776 || ||||||| | || || | |||||| | || || || | |||| || || ||||| Sbjct 421200 CAAAGAAACTTTCTTGACCAATAGGGTAGATCAAGAAAACAGCAGTA-GCAGCTGCAACA 421258 Query 5777 GG 5778 || Sbjct 421259 GG 421260 Score = 80.6 bits (88), Expect = 8e-11 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 5210 AAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTGGCACGGTTCAGGACA 5269 || |||| |||||| ||||| ||||||||||||||||||||||| ||||| || || | Sbjct 6705874 AACTTGTAAGCATTACGTTCATGCATTACTTCCATACCAAGGTTAGCACGATTGGAGATA 6705933 Query 5270 TCTGCCCAAGTG 5281 || ||||||||| Sbjct 6705934 TCAGCCCAAGTG 6705945 >seq7 Length=14728688 Score = 125 bits (138), Expect = 2e-24 Identities = 202/288 (70%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 5891 TATGGTCCTCCATTGTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAG 5950 || || || |||||| | | ||| ||||| | | |||||||||||||| || || || Sbjct 2867794 TAAGGACCGCCATTGCATAACCACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAA 2867735 Query 5951 TGTAACCCAATTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAG 6010 || || || || || || | || | || ||| || || || || ||||||||||| Sbjct 2867734 TGCAAACCTATAGCTGCAGAAGTCGGAATAATGGCACCAGAGATAATATTGTTTCCATAA 2867675 Query 6011 AGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGC-AGCTAC 6069 |||| ||| || | || ||||| || || || || || || ||||| || || ||| | Sbjct 2867674 AGTAAAGAACCAGAAACAGGTTCGCGAATACCATCAATATCTACTGGAGGAGCAAGCAAT 2867615 Query 6070 GAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAA 6129 ||| || | |||||| ||| ||||| ||| || | | || ||||| || ||||| || Sbjct 2867614 GAAGGCGATAATAAATACAGAAGTTG-GGTCAATAAGGTAGGGATCATCAAAACACCGAA 2867556 Query 6130 CCACCCCACATAGAGGCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 ||| || | || || || || | ||||| || | ||||| ||||| Sbjct 2867555 CCATCCAATGTAAAGACGATTTTCAGTGCTGGTTATCCAGTTGCAGAA 2867508 >seq13 Length=11759267 Score = 102 bits (112), Expect = 2e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 5999 TTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGG 6058 ||||||||||| |||| ||| || | || ||||| || || || || || || ||||| Sbjct 4917756 TTGTTTCCATAAAGTAAAGAACCAGAAACAGGTTCGCGAATACCATCAATATCTACTGGA 4917697 Query 6059 GGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATT 6118 || ||||| | ||| || | |||||| ||| ||||||||| || | | || ||||| Sbjct 4917696 GGAGCAGCAATGAAGGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATC 4917637 Query 6119 AAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || ||||| ||||| || | || || || || | ||||| || | ||||| ||||| Sbjct 4917636 AAAACACCGAACCATCCAATGTAAAGACGATTTTCAGTGCTGGTTATCCAGTTGCAGAA 4917578 >seq5 Length=15024279 Score = 96.9 bits (106), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 19/219 (9%) Strand=Plus/Minus Query 5579 CCATGCATAGCAGCGAACAAAGCTCCACCGAATACCCCAGCAACACCGAGCATGTGGAAC 5638 ||||||||| || ||| | | || || ||||| ||||| ||||| | |||||| || Sbjct 7273422 CCATGCATACCACTGAATAGGGAGCCGCCAAATACACCAGCTACACCTAACATGTGAAAT 7273363 Query 5639 GGATGCATAAGGAT--------ATTGTGTTCTGCCTGGAATACGAACATAAAGTTAAAAG 5690 ||||||||||||| ||||| |||||||| ||||| | ||||||||| |||| Sbjct 7273362 TGATGCATAAGGATGTTGTGCACTTGTGCTCTGCCTGAAATACAATCATAAAGTTGAAAG 7273303 Query 5691 TACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCTGTCCGAAAGGGTATACTA 5750 ||| |||||| || | || || ||||||| | || || | |||||| | | Sbjct 7273302 TACTAGAGATTCCTAAAG---------CAGAGAAACTTTCTTGACCAATAGGGTAGATCA 7273252 Query 5751 AAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATAT 5788 | || || | | || || | ||||| || ||| ||||| Sbjct 7273251 AGAAAACAGCAATA-GCAGTTGCAACAGGAGCTAAATAT 7273214 >seq6 Length=14747297 Score = 87.8 bits (96), Expect = 5e-13 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 5603 CCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCT 5662 || |||||||| ||||| ||||| | |||||| || |||||||||||||| ||||| ||| Sbjct 4210567 CCGCCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCT 4210508 Query 5663 GCCTGGAATAC 5673 ||||||||||| Sbjct 4210507 GCCTGGAATAC 4210497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152643928017894