Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq3129 529 5e-146 seq3033 529 5e-146 seq559 520 3e-143 seq488 520 3e-143 seq7 136 1e-27 seq18 123 8e-24 seq5 123 8e-24 seq13 89.7 2e-13 seq9 86.0 2e-12 >seq3129 Length=159636 Score = 529 bits (586), Expect = 5e-146 Identities = 713/988 (72%), Gaps = 6/988 (1%) Strand=Plus/Plus Query 25444 TCAGCAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 25503 ||| ||| |||| ||| |||||||||||||| || ||||| |||||||| |||||||| Sbjct 93 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATA 152 Query 25504 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 25563 || | || ||||| || | || ||||||||||| | || | || | ||| Sbjct 153 CCAAGGTTAGCACGATTGATGATATCAGCCCAAGTGTTAATAACACGACCCTGACTGTCA 212 Query 25564 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 25623 || ||||| || ||||| || || || || || || ||||||||||| | || | | Sbjct 213 ACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAA 272 Query 25624 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTA 25683 | || | ||| || | || ||||||||||||| ||||||||||||| ||| | Sbjct 273 GAAGTGAACCAGATACCTACTACAGGCCAAGCAGCCAAGAAGAAATGTAAAGAACGAGAA 332 Query 25684 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 25743 || || || |||||||| |||||||| | || ||||| || |||||||| || ||||| Sbjct 333 TTGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCTACAATA 392 Query 25744 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 25803 ||||| || ||| | ||||| |||||| | || || | || ||| || |||| Sbjct 393 TTATAAGTTTCTCCCTCTTGACCGAATCTGTAACCTTCATTAGCAGACTCGTTTTCAGTG 452 Query 25804 GTTTCACGAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCT 25860 ||||| | || || | |||| || |||| || ||||||||| ||||| | Sbjct 453 GTTTCCCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAG 509 Query 25861 CCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCT 25920 || |||||||| || || ||||| | ||| || || |||||||||||||| ||||| ||| Sbjct 510 CCGCCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCT 569 Query 25921 GCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAG 25980 ||||| || |||| |||||| |||||||| || || || || | |||||||||||||||| Sbjct 570 GCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAG 629 Query 25981 AAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCT 26040 ||||| ||||| |||| |||||||| ||||| |||||| || ||||||||||| ||| Sbjct 630 AAACTTCCTTGACCAATAGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCT 689 Query 26041 GAATAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGT 26100 ||||| || ||| ||||| || | ||| || || | ||||||||||||| | || Sbjct 690 GAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGA 749 Query 26101 CCCAAGTAAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCG 26160 |||| |||| | | || | | ||||| | ||||| || | ||| || || || Sbjct 750 CCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCA 809 Query 26161 TTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATT 26220 || || |||||||| || | | ||| ||||||||||||||||| || || | ||| || Sbjct 810 TTGTATAACCACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGCAAACCTATA 869 Query 26221 GCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCT 26280 || ||| | ||| | || || || ||||| || ||||||||||| ||||| | || Sbjct 870 GCTGCAGAAGTCGGAATAATGGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCA 929 Query 26281 GAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAA 26340 || ||||| || ||||||||||| ||||| || ||||| ||||||| || || || | | Sbjct 930 GAAACAGGTTCGCGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATA 989 Query 26341 AATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAG 26400 ||| | | ||| || || | | ||||||||| | || || ||||| || | || Sbjct 990 AATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCAATGTAA 1049 Query 26401 AGGCGGTTGTTTGTACTTGTAACCCAGT 26428 || || || | || || || | ||||| Sbjct 1050 AGACGATTTTCAGTGCTGGTTATCCAGT 1077 >seq3033 Length=62413 Score = 529 bits (586), Expect = 5e-146 Identities = 713/988 (72%), Gaps = 6/988 (1%) Strand=Plus/Plus Query 25444 TCAGCAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 25503 ||| ||| |||| ||| |||||||||||||| || ||||| |||||||| |||||||| Sbjct 52642 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATA 52701 Query 25504 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 25563 || | || ||||| || | || ||||||||||| | || | || | ||| Sbjct 52702 CCAAGGTTAGCACGATTGATGATATCAGCCCAAGTGTTAATAACACGACCCTGACTGTCA 52761 Query 25564 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 25623 || ||||| || ||||| || || || || || || ||||||||||| | || | | Sbjct 52762 ACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAA 52821 Query 25624 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTA 25683 | || | ||| || | || ||||||||||||| ||||||||||||| ||| | Sbjct 52822 GAAGTGAACCAGATACCTACTACAGGCCAAGCAGCCAAGAAGAAATGTAAAGAACGAGAA 52881 Query 25684 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 25743 || || || |||||||| |||||||| | || ||||| || |||||||| || ||||| Sbjct 52882 TTGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCTACAATA 52941 Query 25744 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 25803 ||||| || ||| | ||||| |||||| | || || | || ||| || |||| Sbjct 52942 TTATAAGTTTCTCCCTCTTGACCGAATCTGTAACCTTCATTAGCAGACTCGTTTTCAGTG 53001 Query 25804 GTTTCACGAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCT 25860 ||||| | || || | |||| || |||| || ||||||||| ||||| | Sbjct 53002 GTTTCCCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAG 53058 Query 25861 CCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCT 25920 || |||||||| || || ||||| | ||| || || |||||||||||||| ||||| ||| Sbjct 53059 CCGCCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCT 53118 Query 25921 GCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAG 25980 ||||| || |||| |||||| |||||||| || || || || | |||||||||||||||| Sbjct 53119 GCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAG 53178 Query 25981 AAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCT 26040 ||||| ||||| |||| |||||||| ||||| |||||| || ||||||||||| ||| Sbjct 53179 AAACTTCCTTGACCAATAGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCT 53238 Query 26041 GAATAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGT 26100 ||||| || ||| ||||| || | ||| || || | ||||||||||||| | || Sbjct 53239 GAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGA 53298 Query 26101 CCCAAGTAAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCG 26160 |||| |||| | | || | | ||||| | ||||| || | ||| || || || Sbjct 53299 CCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCA 53358 Query 26161 TTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATT 26220 || || |||||||| || | | ||| ||||||||||||||||| || || | ||| || Sbjct 53359 TTGTATAACCACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGCAAACCTATA 53418 Query 26221 GCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCT 26280 || ||| | ||| | || || || ||||| || ||||||||||| ||||| | || Sbjct 53419 GCTGCAGAAGTCGGAATAATGGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCA 53478 Query 26281 GAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAA 26340 || ||||| || ||||||||||| ||||| || ||||| ||||||| || || || | | Sbjct 53479 GAAACAGGTTCGCGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATA 53538 Query 26341 AATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAG 26400 ||| | | ||| || || | | ||||||||| | || || ||||| || | || Sbjct 53539 AATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCAATGTAA 53598 Query 26401 AGGCGGTTGTTTGTACTTGTAACCCAGT 26428 || || || | || || || | ||||| Sbjct 53599 AGACGATTTTCAGTGCTGGTTATCCAGT 53626 >seq559 Length=26669 Score = 520 bits (576), Expect = 3e-143 Identities = 708/988 (72%), Gaps = 0/988 (0%) Strand=Plus/Plus Query 25448 CAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTA 25507 |||| |||||||| |||||||| || || || ||||| ||||||||||||||||| || | Sbjct 22380 CAGAAGCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAA 22439 Query 25508 AGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGA 25567 || ||||| |||| ||| |||||||| || | || | || | |||||| | Sbjct 22440 GGTTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTA 22499 Query 25568 CTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGG 25627 | || || ||||| || || || || | || |||||||||||| || || | ||||| Sbjct 22500 CAGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGG 22559 Query 25628 TAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTAT 25687 | | ||| || | || |||||||| || ||||||||||||||| ||| ||| | Sbjct 22560 TGAACCAGATACCTACTACAGGCCAAGCCGCTAGGAAGAAATGTAAAGAACGAGAATTGT 22619 Query 25688 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 25747 | || |||||||| ||||| || | || ||||| || |||||||| || || || |||| Sbjct 22620 TGAAACTAGCATATTGGAAAATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTAT 22679 Query 25748 ACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTT 25807 | || ||||| ||||| |||||| | || || | ||| ||||||| | || |||| Sbjct 22680 AAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTT 22739 Query 25808 CACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGA 25867 | | || | ||||| || | || ||||||||| ||||| || || |||| Sbjct 22740 CCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGAGAACCGCCGA 22799 Query 25868 ATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAA 25927 |||| || || ||||| | ||| || || || ||||||||||| ||||| || ||||| | Sbjct 22800 ATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 22859 Query 25928 AGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCC 25987 | |||| ||| || |||||||| || ||||| || ||||||||||| ||||| || || | Sbjct 22860 ATACAATCATGAAGTTGAAAGTACCAGAAATCCCTAGAGGCATACCGTCAGAAAAGCTTC 22919 Query 25988 CTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAG 26047 |||| |||| || || | ||||| || ||| ||| || ||||| || |||||||| | Sbjct 22920 CTTGACCAATGGGATATATCAAGAAAACGGCAGTTGCAGCAGCAACTGGAGCTGAATATG 22979 Query 26048 CTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGT 26107 | ||| ||||| || | ||| || || | ||||||||||||| | || |||| | Sbjct 22980 CAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATAT 23039 Query 26108 AAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACA 26167 || | | || | | ||||| | ||||| || | ||| || || || || || | Sbjct 23040 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATA 23099 Query 26168 ACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAG 26227 |||| || || | || ||||||||||| |||||||| ||||| | ||| || || || Sbjct 23100 ACCATTCATCAACGGAAGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAG 23159 Query 26228 ATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAG 26287 | | || | || || || || || || || ||||| || |||| | ||| || |||| Sbjct 23160 AAGTAGGAATAATGGCACCAGAAATAATATTATTTCCGTAAAGTAGAGATCCAGAAACAG 23219 Query 26288 GCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTG 26347 | |||||||||||||| |||||||| ||||| ||||||| || ||||| | |||| | | Sbjct 23220 GTTCACGAATACCATCAATATCCACCGGAGGAGCAGCAATGAAAGCAATAATAAATACAG 23279 Query 26348 TCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGT 26407 ||| || || | | ||||||||| | || |||||||| || | || || |||| Sbjct 23280 AAGTTGCGGTCAATAAGGTAGGGATCATCAAAACGCCAAACCATCCAATGTAAAGACGGT 23339 Query 26408 TGTTTGTACTTGTAACCCAGTCACATAA 26435 | | || || || | ||||| ||| || Sbjct 23340 TTTCAGTGCTGGTTATCCAGTTACAGAA 23367 >seq488 Length=28536 Score = 520 bits (576), Expect = 3e-143 Identities = 708/988 (72%), Gaps = 0/988 (0%) Strand=Plus/Plus Query 25448 CAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTA 25507 |||| |||||||| |||||||| || || || ||||| ||||||||||||||||| || | Sbjct 22435 CAGAAGCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAA 22494 Query 25508 AGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGA 25567 || ||||| |||| ||| |||||||| || | || | || | |||||| | Sbjct 22495 GGTTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTA 22554 Query 25568 CTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGG 25627 | || || ||||| || || || || | || |||||||||||| || || | ||||| Sbjct 22555 CAGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGG 22614 Query 25628 TAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTAT 25687 | | ||| || | || |||||||| || ||||||||||||||| ||| ||| | Sbjct 22615 TGAACCAGATACCTACTACAGGCCAAGCCGCTAGGAAGAAATGTAAAGAACGAGAATTGT 22674 Query 25688 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 25747 | || |||||||| ||||| || | || ||||| || |||||||| || || || |||| Sbjct 22675 TGAAACTAGCATATTGGAAAATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTAT 22734 Query 25748 ACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTT 25807 | || ||||| ||||| |||||| | || || | ||| ||||||| | || |||| Sbjct 22735 AAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTT 22794 Query 25808 CACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGA 25867 | | || | ||||| || | || ||||||||| ||||| || || |||| Sbjct 22795 CCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGAGAACCGCCGA 22854 Query 25868 ATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAA 25927 |||| || || ||||| | ||| || || || ||||||||||| ||||| || ||||| | Sbjct 22855 ATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 22914 Query 25928 AGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCC 25987 | |||| ||| || |||||||| || ||||| || ||||||||||| ||||| || || | Sbjct 22915 ATACAATCATGAAGTTGAAAGTACCAGAAATCCCTAGAGGCATACCGTCAGAAAAGCTTC 22974 Query 25988 CTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAG 26047 |||| |||| || || | ||||| || ||| ||| || ||||| || |||||||| | Sbjct 22975 CTTGACCAATGGGATATATCAAGAAAACGGCAGTTGCAGCAGCAACTGGAGCTGAATATG 23034 Query 26048 CTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGT 26107 | ||| ||||| || | ||| || || | ||||||||||||| | || |||| | Sbjct 23035 CAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATAT 23094 Query 26108 AAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACA 26167 || | | || | | ||||| | ||||| || | ||| || || || || || | Sbjct 23095 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATA 23154 Query 26168 ACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAG 26227 |||| || || | || ||||||||||| |||||||| ||||| | ||| || || || Sbjct 23155 ACCATTCATCAACGGAAGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAG 23214 Query 26228 ATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAG 26287 | | || | || || || || || || || ||||| || |||| | ||| || |||| Sbjct 23215 AAGTAGGAATAATGGCACCAGAAATAATATTATTTCCGTAAAGTAGAGATCCAGAAACAG 23274 Query 26288 GCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTG 26347 | |||||||||||||| |||||||| ||||| ||||||| || ||||| | |||| | | Sbjct 23275 GTTCACGAATACCATCAATATCCACCGGAGGAGCAGCAATGAAAGCAATAATAAATACAG 23334 Query 26348 TCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGT 26407 ||| || || | | ||||||||| | || |||||||| || | || || |||| Sbjct 23335 AAGTTGCGGTCAATAAGGTAGGGATCATCAAAACGCCAAACCATCCAATGTAAAGACGGT 23394 Query 26408 TGTTTGTACTTGTAACCCAGTCACATAA 26435 | | || || || | ||||| ||| || Sbjct 23395 TTTCAGTGCTGGTTATCCAGTTACAGAA 23422 >seq7 Length=14728688 Score = 136 bits (150), Expect = 1e-27 Identities = 213/302 (71%), Gaps = 2/302 (1%) Strand=Plus/Minus Query 26128 AAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCACTCGTCGAGGGTTGCA 26187 ||||| | ||||| || | ||| || || || || | |||||||| || | | ||| Sbjct 2867815 AAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGCATAACCACTCATCAACAGATGCT 2867756 Query 26188 GCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCT 26247 ||||||||||||||||| || || | ||| || || ||| | ||| | || || || Sbjct 2867755 GCTTCCCAGATTGGGTAAAAATGCAAACCTATAGCTGCAGAAGTCGGAATAATGGCACCA 2867696 Query 26248 GAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATA 26307 ||||| || ||||||||||| ||||| | || || ||||| || ||||||||||| ||| Sbjct 2867695 GAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGTTCGCGAATACCATCAATA 2867636 Query 26308 TCCACGGGAGGCGC-AGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGC 26366 || || ||||| || ||||| || || || | |||| | | | | || || | | Sbjct 2867635 TCTACTGGAGGAGCAAGCAATGAAGGCGATAATAAATACAG-AAGTTGGGTCAATAAGGT 2867577 Query 26367 AGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCA 26426 ||||||||| | || || ||||| || | || || || || | || || || | ||| Sbjct 2867576 AGGGATCATCAAAACACCGAACCATCCAATGTAAAGACGATTTTCAGTGCTGGTTATCCA 2867517 Query 26427 GT 26428 || Sbjct 2867516 GT 2867515 >seq18 Length=10911977 Score = 123 bits (136), Expect = 8e-24 Identities = 133/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 25837 CCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAAC 25896 || ||||||||| ||||| | || |||||||| || || ||||| | ||| | || Sbjct 6706347 CCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACACCTAACATGAGAAAT 6706406 Query 25897 GGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAA 25956 ||||| || |||||||||||| | | || || |||| |||||| |||||||| | || Sbjct 6706407 AGATGCGTATGGATATTGTGTTTTACTTGGAATACAATCATAAAGTTGAAAGTACTAGAG 6706466 Query 25957 ATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAA 26012 || || | ||||||||||| ||||||||| |||| |||| || | ||| ||||| Sbjct 6706467 ATTCCTAAAGGCATACCATGAGAGAAACTTTCTTGGCCAATAGCGCAGATCAAGAA 6706522 Score = 98.7 bits (108), Expect = 3e-16 Identities = 129/181 (71%), Gaps = 17/181 (9%) Strand=Plus/Plus Query 25864 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGT------ 25917 || ||||| || || ||||| | ||| || || ||||||||||||| ||||| Sbjct 421089 CCAAATACACCAGCTACACCTAACATGTGAAATTGATGCATAAGGATGTTGTGCACTTGT 421148 Query 25918 --TCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCAT 25975 |||||||| || |||| |||||| |||||||| | || || || | || Sbjct 421149 GCTCTGCCTGGAATACAATCATAAAGTTGAAAGTACTAGAGATTCCTAAAG--------- 421199 Query 25976 CAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAG 26035 || ||||||| |||| |||| |||||||| ||||| |||||| || |||||||||| Sbjct 421200 CAAAGAAACTTTCTTGACCAATAGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAG 421259 Query 26036 G 26036 | Sbjct 421260 G 421260 >seq5 Length=15024279 Score = 123 bits (136), Expect = 8e-24 Identities = 156/217 (72%), Gaps = 17/217 (8%) Strand=Plus/Minus Query 25837 CCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAAC 25896 || |||||| || ||||| | || || ||||| || || ||||| | ||| || || Sbjct 7273422 CCATGCATACCACTGAATAGGGAGCCGCCAAATACACCAGCTACACCTAACATGTGAAAT 7273363 Query 25897 GGATGCATAAGGAT--------ATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAG 25948 ||||||||||||| ||||| ||||||||||| |||| |||||| ||||||| Sbjct 7273362 TGATGCATAAGGATGTTGTGCACTTGTGCTCTGCCTGAAATACAATCATAAAGTTGAAAG 7273303 Query 25949 TCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTA 26008 | | || || || | || |||||||||| |||| |||| |||||||| | Sbjct 7273302 TACTAGAGATTCCTAAAG---------CAGAGAAACTTTCTTGACCAATAGGGTAGATCA 7273252 Query 26009 AGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATA 26045 |||| ||||||| || | ||||||||| ||| |||| Sbjct 7273251 AGAAAACAGCAATAGCAGTTGCAACAGGAGCTAAATA 7273215 Score = 100 bits (110), Expect = 9e-17 Identities = 111/147 (76%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 26184 TGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGC 26243 ||| |||||| ||||||| ||||| || | ||| || || ||| | ||| | || || Sbjct 14840501 TGCTGCTTCC-AGATTGGATAGAAATGCAAACCTATGGCTGCAGAAGTCGGAATAATGGC 14840443 Query 26244 CCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATC 26303 || ||||| || |||||||| || ||||| | || || ||| | |||||||||||||| Sbjct 14840442 ACCAGAGATAATATTGTTTCCGTAAAGTAAAGAACCCGAAACAAGTTCACGAATACCATC 14840383 Query 26304 TATATCCACGGGAGGCGCAGCAACAAA 26330 ||||| || ||||| | ||||| ||| Sbjct 14840382 AATATCTACCGGAGGAGTAGCAATAAA 14840356 >seq13 Length=11759267 Score = 89.7 bits (98), Expect = 2e-13 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 26257 TTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGA 26316 ||||||||||| ||||| | || || ||||| || ||||||||||| ||||| || ||| Sbjct 4917756 TTGTTTCCATAAAGTAAAGAACCAGAAACAGGTTCGCGAATACCATCAATATCTACTGGA 4917697 Query 26317 GGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATT 26376 || ||||||| || || || | |||| | | ||| || || | | ||||||||| Sbjct 4917696 GGAGCAGCAATGAAGGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATC 4917637 Query 26377 AGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAGT 26428 | || || ||||| || | || || || || | || || || | ||||| Sbjct 4917636 AAAACACCGAACCATCCAATGTAAAGACGATTTTCAGTGCTGGTTATCCAGT 4917585 >seq9 Length=13841557 Score = 86.0 bits (94), Expect = 2e-12 Identities = 125/180 (69%), Gaps = 15/180 (8%) Strand=Plus/Plus Query 25837 CCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAAC 25896 ||||||||| || ||||| | || | |||||| ||||| ||||| || || || Sbjct 2268491 CCGTGCATAACACTGAATAGGGAGCCGCTGAATACACCTGCCACACCTTATATGTGAAAT 2268550 Query 25897 GGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAA 25956 ||||||| | ||||||| |||| |||||| |||||||| | || Sbjct 2268551 CGATGCATTA---------------CCTGAAATACAATCATAAAGTTGAAAGTACGAGAG 2268595 Query 25957 ATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACA 26016 || || | ||||||||| ||||||||||| ||||| | | |||||||| || || ||| Sbjct 2268596 ATTCCTATAGGCATACCGTCAGAGAAACTTCCTTGACTAGCAGGGTAGATCAATAAAACA 2268655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151987952392804