Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14]
3,129 sequences; 382,055,938 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq3 131 1e-25
seq7 111 1e-19
seq8 109 4e-19
seq10 107 2e-18
>seq3
Length=16781886
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| ||||||||||| || || ||||| || ||||| || | | || | | |||| ||
Sbjct 16131921 AACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTACTCTGATAAGGTCCGGCCATCCTC 16131862
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
||||||||| || |||||||| | ||||| |||||||| | || |||||||| |||||
Sbjct 16131861 CAATTGCTTCCCAGCAAATATGAGCCGCTGCTGATCGGGAAGGATTCCTTCTTTGTCTTG 16131802
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
|||||| || | |||| | |||||||| | || || || ||||||| || ||
Sbjct 16131801 AATTTTACCCTTCAGGTTTTCAATTGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTT 16131742
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | || || ||||| ||||||||
Sbjct 16131741 TCCAGTGAGGGTCTTCACAAAAATCTGCAT 16131712
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| ||||||||||| || || ||||| || ||||| || | | || | | |||| ||
Sbjct 16199725 AACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTACTCTGATAAGGTCCGGCCATCCTC 16199666
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
||||||||| || |||||||| | ||||| |||||||| | || |||||||| |||||
Sbjct 16199665 CAATTGCTTCCCAGCAAATATGAGCCGCTGCTGATCGGGAAGGATTCCTTCTTTGTCTTG 16199606
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
|||||| || | |||| | |||||||| | || || || ||||||| || ||
Sbjct 16199605 AATTTTACCCTTCAGGTTTTCAATTGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTT 16199546
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | || || ||||| ||||||||
Sbjct 16199545 TCCAGTGAGGGTCTTCACAAAAATCTGCAT 16199516
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| ||||| | ||| | ||| || || |||||||| || | |||||||||||
Sbjct 16131710 CCCCCTCTCAAACGGAGAACAAGATGGAGAGTTGATTCTTTCTGAACATTGTAATCGGAC 16131651
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||||| | || || | |||||| || ||||| || | | ||| || || | ||
Sbjct 16131650 AGAGTTCTCCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGAGGGG 16131591
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || ||||||||| || || | || | || ||||| || || ||
Sbjct 16131590 ATGCCTTCCTTGTCCTGAATTTTTGCCTTGACGTTCTCAATTGTATCAGAGGTCTCAACC 16131531
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| ||||| | || || ||||| | || || ||||| |||||||||
Sbjct 16131530 TCCAGAGTTATGGTCTTTCCGGTAAGGGTCTTGACAAAAATCTGCATG 16131483
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| ||||| | ||| | ||| || || |||||||| || | |||||||||||
Sbjct 16199514 CCCCCTCTCAAACGGAGAACAAGATGGAGAGTTGATTCTTTCTGAACATTGTAATCGGAC 16199455
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||||| | || || | |||||| || ||||| || | | ||| || || | ||
Sbjct 16199454 AGAGTTCTCCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGAGGGG 16199395
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || ||||||||| || || | || | || ||||| || || ||
Sbjct 16199394 ATGCCTTCCTTGTCCTGAATTTTTGCCTTGACGTTCTCAATTGTATCAGAGGTCTCAACC 16199335
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| ||||| | || || ||||| | || || ||||| |||||||||
Sbjct 16199334 TCCAGAGTTATGGTCTTTCCGGTAAGGGTCTTGACAAAAATCTGCATG 16199287
>seq7
Length=14728688
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|||||||| ||||| || || || ||||| ||||||| || | | | || || | |||
Sbjct 13850313 TGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 13850254
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||||||||| |||| |||||| || || || || || || || || || || || ||
Sbjct 13850253 TTACCTGCAAAGATCAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGGATCTTC 13850194
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||||| || | || || || || |||| ||| ||||||||
Sbjct 13850193 GCCTTGACATTGTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTGCCGGTG 13850134
Query 101447 AAAGTTTTTACAAATATCTGCATG 101470
| || || || || |||||||||
Sbjct 13850133 AGGGTCTTGACGAAGATCTGCATG 13850110
>seq8
Length=13970067
Score = 109 bits (120), Expect = 4e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|||||||| ||||| || || || |||||||| || | || | | |||| || | |||
Sbjct 10823292 TGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGGCCATCCTCAAGCTGC 10823351
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || ||||||||||| || || |||||||| || || || || ||||| ||
Sbjct 10823352 TTCCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCCTCCTTGTCCTGAATCTTA 10823411
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||| || || | || || || | |||| ||| ||||||||
Sbjct 10823412 GCCTTCACATTATCAATAGTATCGGAGCTCTCAACCTCCAAGGTGATCGTCTTGCCGGTG 10823471
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || ||||| || |||||
Sbjct 10823472 AGGGTCTTGACAAAGATTTGCAT 10823494
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| |||| || | ||| | || || || || || || || || ||||| ||||||
Sbjct 10824180 CCTCCCCTTAGGCGAAGAACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 10824239
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | | || || | ||||| || || || || | ||||| || || || |||
Sbjct 10824240 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGCCGCTGCTGGTCCGGGGGA 10824299
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || || || || || ||| | || | |||||||| | |||||
Sbjct 10824300 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTCTCCACC 10824359
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| |||| || |||||||| | ||||| || || ||||||||
Sbjct 10824360 TCAAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 10824406
>seq10
Length=13112115
Score = 107 bits (118), Expect = 2e-18
Identities = 150/207 (72%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATA-GTTCTGG-CATCGTCCAAT 101323
||||||||| ||||| ||||| |||||||| || ||||| | | | |||| ||||||
Sbjct 3654289 ATGAAGGGTGGATTCCTTTTGAATATTGTAGTC--CGATAAGCACCGATCATCCTCCAAT 3654346
Query 101324 TGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATT 101383
||||| ||||| || |||| ||||| || || || || ||||| || || || || ||
Sbjct 3654347 TGCTTCCCTGCGAAGATCAGCCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATC 3654406
Query 101384 TTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCG 101443
|| || ||| | | || ||||| || | || || || ||||||| || || |||
Sbjct 3654407 TTCGACTTCACATTGGCAACGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTTCCG 3654466
Query 101444 GTTAAAGTTTTTACAAATATCTGCATG 101470
|| | || || || || |||||||||
Sbjct 3654467 GTGAGGGTCTTCACGAAGATCTGCATG 3654493
Score = 105 bits (116), Expect = 5e-18
Identities = 141/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||||||||| || || || | ||||||||| || ||| | ||| ||||| |||
Sbjct 3658448 TGAAGGGTAGACTCCTTCTGCACATTGTAATCCCTGAGAGTGCGATTATCCTCCAACTGC 3658507
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||| || | | |||||| ||| | |||||||| || ||||| || || ||
Sbjct 3658508 TTACCAGCAAAGATGAGCCTCTGTTGGTCGTGGGGAATGCCCTCCTTATCCTGGATCTTA 3658567
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| |||| | ||||| || | || || |||||||| | || ||||| |||
Sbjct 3658568 GCCTTCACATTTTCAATCGTGTCGGAGCTCTCAACCTCAAGAGTAATAGTCTTGCCTGTT 3658627
Query 101447 AAAGTTTTTACAAATA 101462
||| || ||| |||
Sbjct 3658628 GGAGTATTCACATATA 3658643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396263288047053
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