Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq3129 84.2 5e-11 seq21 84.2 5e-11 seq12 84.2 5e-11 seq3 84.2 5e-11 >seq3129 Length=159636 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479 ||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||| Sbjct 38966 GCGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 38910 Query 324480 AATCCCACCTCCGCA 324494 ||||| ||||||| Sbjct 38909 AATCCTGTCTCCGCA 38895 >seq21 Length=10645290 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479 ||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||| Sbjct 5426578 GCGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 5426634 Query 324480 AATCCCACCTCCGCA 324494 ||||| ||||||| Sbjct 5426635 AATCCTGTCTCCGCA 5426649 >seq12 Length=12612916 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479 ||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||| Sbjct 11697166 GCGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 11697110 Query 324480 AATCCCACCTCCGCA 324494 ||||| ||||||| Sbjct 11697109 AATCCTGTCTCCGCA 11697095 >seq3 Length=16781886 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479 ||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||| Sbjct 11587082 GCGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 11587138 Query 324480 AATCCCACCTCCGCA 324494 ||||| ||||||| Sbjct 11587139 AATCCTGTCTCCGCA 11587153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147544392742242