Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14]
3,129 sequences; 382,055,938 total letters
Query= NC_019929.1
Length=243050
Score E
Sequences producing significant alignments: (Bits) Value
seq3129 91.5 2e-13
seq22 91.5 2e-13
seq1332 86.0 1e-11
seq918 86.0 1e-11
>seq3129
Length=159636
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| || |||||||||||
Sbjct 33092 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGTTGCGGGTTCGAG 33034
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 33033 CCCCGTCAGTCC 33022
>seq22
Length=10398566
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| || |||||||||||
Sbjct 5049580 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGTTGCGGGTTCGAG 5049638
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 5049639 CCCCGTCAGTCC 5049650
>seq1332
Length=12391
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 12000 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 12058
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 12059 CCCCGTCAGTCC 12070
>seq918
Length=372633
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 261084 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 261026
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 261025 CCCCGTCAGTCC 261014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 777601584868400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |