Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq3129 91.5 2e-13 seq22 91.5 2e-13 seq1332 86.0 1e-11 seq918 86.0 1e-11 >seq3129 Length=159636 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| |||||| |||| ||||||||||| |||||| || ||||||||||| Sbjct 33092 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGTTGCGGGTTCGAG 33034 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 33033 CCCCGTCAGTCC 33022 >seq22 Length=10398566 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| |||||| |||| ||||||||||| |||||| || ||||||||||| Sbjct 5049580 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGTTGCGGGTTCGAG 5049638 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 5049639 CCCCGTCAGTCC 5049650 >seq1332 Length=12391 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| |||||| |||| ||||||||||| |||||| | ||||||||||| Sbjct 12000 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 12058 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 12059 CCCCGTCAGTCC 12070 >seq918 Length=372633 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| |||||| |||| ||||||||||| |||||| | ||||||||||| Sbjct 261084 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 261026 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 261025 CCCCGTCAGTCC 261014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777601584868400