Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq23 141 6e-28 seq3 109 4e-18 seq2912 107 1e-17 seq8 107 1e-17 seq2035 102 5e-16 seq18 96.9 2e-14 seq12 95.1 8e-14 seq20 89.7 3e-12 >seq23 Length=7979763 Score = 141 bits (156), Expect = 6e-28 Identities = 569/880 (65%), Gaps = 22/880 (3%) Strand=Plus/Minus Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421 ||||||||||| ||| | || | || ||||| || ||||| || || | || ||||| Sbjct 732057 GCAACAGCTGGGGATACTCACTTGGGGGGTGAGGACTTTGACAACAGGATGGTGAATCAT 731998 Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTT--TCAACATCTGCTAAAGC 475479 | |||| | || ||||||||||| | || ||| || | | | | ||| || Sbjct 731997 --TTTGTTCAGGAGTTCAAGAGGAAGCACAAGAAGGATATTAGTGGAAACC--CTAGGGC 731942 Query 475480 ATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCA 475539 | | | ||| | ||||| || || | || ||| | | || ||||| | | || Sbjct 731941 TCTTCGCAGGCTTCGGACTGCATGCGAGAGGGCAAAGAGGACCCTCTCTTCCACCGCCCA 731882 Query 475540 AACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCT--TATTACA 475597 ||| || | ||| |||| || |||| ||| || | |||| ||||| ||||||| Sbjct 731881 AACAACAATCGAAATTGACTCCCTTTATGAGGGCGTCGATTTC--TACTCGACTATTACA 731824 Query 475598 AGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAA 475657 || || | |||||| || | || || || ||||| || || || ||||| Sbjct 731823 AGAGCCAGATTTGAGGAGCTCAACATGGACCTGTTCAGAAAGTGCATGGAGCCTGTTGAG 731764 Query 475658 CAAGTTCTCA-GAGATTCTAAACTTGACAA-ATCACAAGTCCATGAAATTGTTCTTGTAG 475715 |||| || | ||||| | || | ||||| | || || ||||| |||| || || | Sbjct 731763 -AAGTGCTTAAGAGATGCCAAGATGGACAAGAGCAGC-GTACATGATGTTGTCCTGGTCG 731706 Query 475716 GAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATAT-TTTAATGGTAAA 475774 | || || || ||||||| | | | |||| || | | |||||||| || Sbjct 731705 GTGGGTCGACCCGAATTCCCAGGGTTCAGCAGCTGCTG-CAGGACTTCTTTAATGGAAAG 731647 Query 475775 AAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAG 475832 |||| || ||| | | || || || ||||||||||| ||||| ||||| ||||| | Sbjct 731646 GAGTTG--TGCAAGAGCATCAACCCCGACGAAGCTGTTGCTTATGGGGCTGCGGTCCAGG 731589 Query 475833 CAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAA 475892 | || ||||| ||| || | || ||| || | | || | || | || || | Sbjct 731588 CCGCAATTTTGAGCGGTGAAGGCAATGAAAAAGTACAAGACCTTCTCCTCTTGGATGTTA 731529 Query 475893 CTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAA 475952 |||| |||||| | ||||| ||||| | |||||| | |||||| |||||| || | Sbjct 731528 CTCCTCTTTCACTCGGTCTGGAAACTGCTGGAGGAGTCATGACTGTTCTTATCCCGAGGA 731469 Query 475953 ATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAA 476012 | || ||||||| ||| ||| | || || || || ||||||||||| || | Sbjct 731468 ACACCACTATCCCGACCAAGAAAGAGCAGGTGTTCTCGACCTATTCTGATAACCAGCCCG 731409 Query 476013 CTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTG 476072 ||| || || | | ||| ||||| || | || || || || || |||| Sbjct 731408 GTGTTTTGATTCAGGTTTATGAGGGTGAGAGGACGAGGACAAAGGACAACAATCTCCTTG 731349 Query 476073 GAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTA 476132 | | || | || ||||||||||||||||| || || || ||||| || || Sbjct 731348 GTAAATTCGAGCTCTCTGGTATTCCTCCTGCTCCTAGGGGTGTGCCTCAGATCACCGTCT 731289 Query 476133 CTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACA 476192 ||| ||||||||||| || ||||| | ||||| ||||| ||||| ||| | Sbjct 731288 GTTTCGATATTGATGCCAACGGTATCTTGAATGTCTCTGCTGAGGATAAGACTACTGGGC 731229 Query 476193 AGAGTAAAAATATAACTATTACAAACAATCGTGGTAGATT 476232 ||| || || || || || || ||| || || ||||| Sbjct 731228 AGAAGAATAAGATCACCATCACCAACGATAAGGGCAGATT 731189 >seq3 Length=16781886 Score = 109 bits (120), Expect = 4e-18 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 480557 ACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTT 480616 |||||| |||||||| || || |||||| |||||| ||||| | |||||||| Sbjct 16131699 ACGGAGAACAAGATGGAGAGTTGATTCTTTCTGAACATTGTAATCGGACAGAGTTCTCCC 16131640 Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 || || |||||||| |||||||| || || | || || || | || || |||||||| Sbjct 16131639 GTCCTCGAGTTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGAGGGGATGCCTTCCTT 16131580 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||| ||||| ||| ||||| ||||| ||||||| || | || || || || | Sbjct 16131579 GTCCTGAATTTTTGCCTTGACGTTCTCAATTGTATCAGAGGTCTCAA-CCTCCAGAGTTA 16131521 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || ||||| || ||||| || ||||| || Sbjct 16131520 TGGTCTTTCCGGTAAGGGTCTTGACAAAAATCTG 16131487 Score = 109 bits (120), Expect = 4e-18 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 480557 ACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTT 480616 |||||| |||||||| || || |||||| |||||| ||||| | |||||||| Sbjct 16199503 ACGGAGAACAAGATGGAGAGTTGATTCTTTCTGAACATTGTAATCGGACAGAGTTCTCCC 16199444 Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 || || |||||||| |||||||| || || | || || || | || || |||||||| Sbjct 16199443 GTCCTCGAGTTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGAGGGGATGCCTTCCTT 16199384 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||| ||||| ||| ||||| ||||| ||||||| || | || || || || | Sbjct 16199383 GTCCTGAATTTTTGCCTTGACGTTCTCAATTGTATCAGAGGTCTCAA-CCTCCAGAGTTA 16199325 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || ||||| || ||||| || ||||| || Sbjct 16199324 TGGTCTTTCCGGTAAGGGTCTTGACAAAAATCTG 16199291 Score = 102 bits (112), Expect = 5e-16 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 474689 AAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 || |||||| |||| ||| ||| ||||| ||| || || | | ||||| ||||| Sbjct 11716122 AAGATGAAAGAAACTGCGGACTCCTATCTCGGAAAATCTGTTTCGAAAGCAGTGATTACC 11716063 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 ||||| || |||||||| ||| | ||| | || || || ||||||||||| | ||||| Sbjct 11716062 GTTCCGGCTTATTTTAACGATGCGCAAAGGCAGGCTACAAAAGATGCGGGCCGGATTGCC 11716003 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || ||| ||||| | ||||| || ||||| || ||||| || | ||||||| Sbjct 11716002 GGGCTTGATGTTCAGAGGATTATAAACGAACCCACTGCAGCGGCTTTGTCTTATGG 11715947 >seq2912 Length=88256 Score = 107 bits (118), Expect = 1e-17 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 474753 CAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTC 474812 |||||||||| |||||| |||| | || |||||||| ||||| |||| ||| || |||| Sbjct 55547 CAGCATATTTCAATGATGCTCAGAGACAGGCAACTAAGGATGCCGGAATAATCGCTGGTC 55606 Query 474813 TTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATA 474872 ||||||| || ||||| || || || ||||| || ||| |||| |||||| | |||| Sbjct 55607 TTAATGTAGCTCGGATTATCAACGAGCCTACAGCTGCTGCAATTGCATATGGTTTAGATA 55666 Query 474873 AGAA 474876 |||| Sbjct 55667 AGAA 55670 Score = 95.1 bits (104), Expect = 8e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 || ||||||||||| || || || ||| |||||| | ||||| |||||||| | ||| Sbjct 54943 ATCGGTATTGATTTGGGCACGACCTACTCTTGTGTCGGTGTTTACAAAAATGGTCATGTA 55002 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || || || ||||||||||||||| | | || ||||| | || |||| || || Sbjct 55003 GAGATCATCGCTAATGACCAAGGTAATCGGATCACCCCATCTTGGGTGGCTTTCACCGAC 55062 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | || || || || || || | || || || | ||| | | | ||| Sbjct 55063 ACCGAGAGGTTAATCGGTGAGGCCGCAAAGAACCAGGCGGCTTTGAATGCGGAGAGGACT 55122 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAA 474543 |||||||||| ||||| | ||||| || || Sbjct 55123 ATTTTTGATGTCAAAAGGCTTATTGGGCGAAA 55154 >seq8 Length=13970067 Score = 107 bits (118), Expect = 1e-17 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 474753 CAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTC 474812 |||||||||| |||||| |||| | || |||||||| ||||| |||| ||| || |||| Sbjct 857742 CAGCATATTTCAATGATGCTCAGAGACAGGCAACTAAGGATGCCGGAATAATCGCTGGTC 857683 Query 474813 TTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATA 474872 ||||||| || ||||| || || || ||||| || ||| |||| |||||| | |||| Sbjct 857682 TTAATGTAGCTCGGATTATCAACGAGCCTACAGCTGCTGCAATTGCATATGGTTTAGATA 857623 Query 474873 AGAA 474876 |||| Sbjct 857622 AGAA 857619 Score = 102 bits (112), Expect = 5e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || || ||||| || ||| || | || ||||| || || || Sbjct 10823273 ACGGAGGCGGAGGACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGCCAGGGT 10823332 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| ||||| ||||| ||||| || || | ||| || || || || ||||| || Sbjct 10823333 GCGGCCATCCTCAAGCTGCTTCCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCC 10823392 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| |||||||| || ||| ||||||||||| | | | | || | ||| Sbjct 10823393 CTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATAGTATCGGAGCTCTCAACCTCCAA 10823452 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || |||||||| ||||| || || ||||| Sbjct 10823453 -GGTGATCGTCTTGCCGGTGAGGGTCTTGACAAAGATTTG 10823491 Score = 96.9 bits (106), Expect = 2e-14 Identities = 129/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| || || || | | ||| || || ||||| || || || || ||||| || Sbjct 10823772 TTGTAATCCGCAAGTGTGCGGCCATCCTCGAGCTGCTTCCCGGCGAAGATCAGACGCTGC 10823831 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 ||||| || ||||| || ||||| || |||||||| |||||| || || || || Sbjct 10823832 TGATCCGGGGGAATGCCCTCCTTATCCTGAATCTTGGCCTTGACATTATCGATGGTGTCG 10823891 Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | | | ||||||||||||| ||||| ||||| ||||| |||||||| || Sbjct 10823892 GAGCTCTCCACCT-CAAGGGTAATAGTCTTACCCGTGAGGGTCTTCACGAAAATCTG 10823947 Score = 95.1 bits (104), Expect = 8e-14 Identities = 100/129 (78%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 |||||||| |||||||| ||||| || |||||| | |||||||| || || |||||||| Sbjct 288290 GCAGTAATCACTGTTCCTGCATACTTCAATGATGCACAACGTCAGGCTACGAAAGATGCA 288349 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 || | ||||| || || |||| | ||||||||||| || || ||||| || ||| Sbjct 288350 GGCCGGATTGCTGGGCTCGATGTCCAGAGAATTATTAATGAGCCCACGGCAGCAGC-CTT 288408 Query 474857 G-CTTATGG 474864 | ||||||| Sbjct 288409 GTCTTATGG 288417 Score = 95.1 bits (104), Expect = 8e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 || ||||||||||| || || || ||| |||||| | ||||| |||||||| | ||| Sbjct 858346 ATCGGTATTGATTTGGGCACGACCTACTCTTGTGTCGGTGTTTACAAAAATGGTCATGTA 858287 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || || || ||||||||||||||| | | || ||||| | || |||| || || Sbjct 858286 GAGATCATCGCTAATGACCAAGGTAATCGGATCACCCCATCTTGGGTGGCTTTCACCGAC 858227 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | || || || || || || | || || || | ||| | | | ||| Sbjct 858226 ACCGAGAGGTTAATCGGTGAGGCCGCAAAGAACCAGGCGGCTTTGAATGCGGAGAGGACT 858167 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAA 474543 |||||||||| ||||| | ||||| || || Sbjct 858166 ATTTTTGATGTCAAAAGGCTTATTGGGCGAAA 858135 Score = 86.0 bits (94), Expect = 4e-11 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 480557 ACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 ||| || ||||| || || || ||| |||| ||| ||||| || || || || | | Sbjct 10823507 ACGAAGAACAAGGTGGAGGGTGGACTC-CTTTTGAATG-TTATAGTCGGCAAGGGTGCGG 10823564 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| ||||| ||||| || || || || || || || || || ||||| || || ||| Sbjct 10823565 CCATCCTCAAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCC 10823624 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734 ||||| |||||||| ||| || ||||| || || | | | | ||||||||| Sbjct 10823625 TTGTCCTGAATCTTCGCTTTCACGTTATCAATGGTGTCCGAGCTTTCAACCTCAAGGGTA 10823684 Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||| ||||| || || || || Sbjct 10823685 ATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTG 10823719 >seq2035 Length=3869 Score = 102 bits (112), Expect = 5e-16 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 474689 AAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 || |||||| |||| ||| ||| ||||| ||| || || | | ||||| ||||| Sbjct 525 AAGATGAAAGAAACTGCGGACTCCTATCTCGGAAAATCTGTTTCGAAAGCAGTGATTACC 584 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 ||||| || |||||||| ||| | ||| | || || || ||||||||||| | ||||| Sbjct 585 GTTCCGGCTTATTTTAACGATGCGCAAAGGCAGGCTACAAAAGATGCGGGCCGGATTGCC 644 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || ||| ||||| | ||||| || ||||| || ||||| || | ||||||| Sbjct 645 GGGCTTGATGTTCAGAGGATTATAAACGAACCCACTGCAGCGGCTTTGTCTTATGG 700 >seq18 Length=10911977 Score = 96.9 bits (106), Expect = 2e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || || || || || || || ||||| || || || ||||||||||| || ||| Sbjct 10391528 ACCGTCCCTGCCTACTTCAACGACTCTCAGCGGCAGGCCACTAAAGATGCAGGTGTCATT 10391469 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || || || ||||| | ||||||||||||||||| ||||| || || |||| ||||| Sbjct 10391468 GCCGGCCTCAATGTCATGCGTATTATTAATGAACCCACAGCGGCTGCTATTGCCTATGGG 10391409 Query 474866 CTTGATAAGAA 474876 ||||| ||||| Sbjct 10391408 CTTGACAAGAA 10391398 >seq12 Length=12612916 Score = 95.1 bits (104), Expect = 8e-14 Identities = 431/670 (64%), Gaps = 10/670 (1%) Strand=Plus/Plus Query 475493 AGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAA 475552 ||||| | ||||| | |||||| | |||| || || || ||||||| || |||| Sbjct 1281799 AGAACCTCATGTGAGAGGGCTAAGAGGACTCTCTCCTCCACTGCTCAAACCACGATTGAG 1281858 Query 475553 GTTGATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTATTACAAGGGCTAAATTTGA 475611 |||||||| | | |||||| |||| || || | || |||||| ||||| ||||| Sbjct 1281859 ATTGATTCTTTGTATGAAGGCGTTGACTTCTACT-CTACGATTACACGGGCTCGGTTTGA 1281917 Query 475612 AGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCA-GAG 475670 ||| | || || || | ||| || || || || || |||| || | ||| Sbjct 1281918 AGAGCTCAACATGGACCTGTTCCGCAAATGCATGGAGCCGGTCGAG-AAGTGCTTAAGAG 1281976 Query 475671 ATTCTAAACTTGACAAAT-CACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGA 475729 || | || | || ||| ||| || || || |||| ||||| || || || || || Sbjct 1281977 ATGCCAAGATGGATAAAAGCACC-GTTCACGACGTTGTCCTTGTTGGTGGCTCCACCAGG 1282035 Query 475730 ATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGT 475789 ||||| | | | | | || | | || ||||| || || | |||| Sbjct 1282036 ATTCCTAGGGTCCAACAGCTTCTCCAAGACTTCTTCAATGGAAAGGAGCTTTGCAAAAGC 1282095 Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 | |||||||||||||||||||| ||||| || || ||||| || ||||| ||||| || Sbjct 1282096 ATCAATCCTGATGAAGCTGTTGCCTATGGGGCGGCAGTCCAGGCCGCTATCTTATCTGGC 1282155 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTT-GACGTAACTCCACTTTCATTAGG 475908 || | || ||| | | | || | ||| || || || || || || || | || Sbjct 1282156 GAAGGCAATGAAAAAGTGCAGGACCTTCT-CTTATTGGATGTTACCCCGCTGTCCCTGGG 1282214 Query 475909 TCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATG 475968 || || |||| || || ||||||| |||||| || ||||| |||| || | Sbjct 1282215 GCTGGAGACAGCCGGTGGTGTTATGACAGTTCTTATCCCAAGGAATACCACTATTCC-TA 1282273 Query 475969 CAAAAAATCA-AAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAA 476027 | ||||| | |||| || || ||||| |||||||| || | ||| ||||| Sbjct 1282274 CTAAAAAGGAGCAAGTCTTCTCTACTTACTCTGATAACCAGCCTGGTGTGTTGATCCAGG 1282333 Query 476028 TCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTG 476087 ||| |||||||| | | || | ||||| || || |||| ||| | || Sbjct 1282334 TCTACGAAGGTGAGCGTACCCGGACCAGGGATAACAATTTGCTCGGAAAATTTGAGCTAT 1282393 Query 476088 AAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATG 476147 || || || ||||| || | || || || || || || ||||| ||||||| Sbjct 1282394 CTGGCATCCCCCCTGCCCCACGTGGTGTCCCACAGATCACCGTCTGCTTTGACATTGATG 1282453 Query 476148 CAAATGGTAT 476157 |||| ||||| Sbjct 1282454 CAAACGGTAT 1282463 Score = 89.7 bits (98), Expect = 3e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || ||||||| || || ||||| || || || || || || || || || |||| Sbjct 1281425 ATGCTGTTGTTACTGTCCCTGCCTATTTCAACGACTCCCAGCGCCAGGCCACCAAGGATG 1281484 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||| ||| | |||||| | | ||||||||||| || || || ||||| Sbjct 1281485 CTGGTGTCATTGCTGGTTTGAATGTTATGAGAATTATTAATGAGCCCACCGCTGCCGCCA 1281544 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||| ||||| || |||||||| Sbjct 1281545 TTGCCTATGGCCTCGATAAGAA 1281566 >seq20 Length=10792357 Score = 89.7 bits (98), Expect = 3e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 290828 CCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCA 290887 ||||||| | | ||| || || |||||||| ||||| |||| ||| || | || ||| Sbjct 10747045 CCATATGAAAGGGCAGCAGCAGTGGGTTCATTGATAATCCTTAGTACTTCTAATCCAGCA 10747104 Query 290888 ATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTA 290947 ||| | | | ||| ||| || || || || |||||||| |||||||| ||||| ||| Sbjct 10747105 ATTCTCCCAGCATCCTTAGTAGCTTGTCGCTGAGCATCATTGAAATAAGCTGGGACAGTA 10747164 Query 290948 ATAACAGCTTTT 290959 |||||||| ||| Sbjct 10747165 ATAACAGCCTTT 10747176 Score = 87.8 bits (96), Expect = 1e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 476084 CTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATT 476143 || ||||| |||||||||||||| ||||| | |||||||||||||||||||| ||||| Sbjct 10746145 CTCGAAGGCATTCCTCCTGCTCCAAGAGGTATGCCTCAAATTGAAGTTACTTTCGATATC 10746086 Query 476144 GATGCAAATGGTATTCTTAATGT 476166 || || ||||| || |||| || Sbjct 10746085 GACGCTAATGGGATAGTTAAGGT 10746063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268044982008092