Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq3129 518 9e-143 seq3033 518 9e-143 seq559 464 2e-126 seq488 464 2e-126 seq7 150 5e-32 seq5 113 1e-20 seq18 89.7 1e-13 >seq3129 Length=159636 Score = 518 bits (574), Expect = 9e-143 Identities = 718/997 (72%), Gaps = 10/997 (1%) Strand=Plus/Plus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||| ||||| ||||||||| ||||||||||| ||||| || ||||||||||||||| Sbjct 93 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATA 152 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT 40643 || || | | || | | |||||||||||| ||| || ||| | | ||| Sbjct 153 CCAAGGTTAGCACGATTGATGATATCAGCCCAAGTGTTAATAACACGACCCTGACTGTCA 212 Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATG 40703 |||||||| ||||| || || |||||||| ||||| |||||||||||| ||||| | Sbjct 213 ACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAA 272 Query 40704 GAGGTAAGCCATATGCCAATAACCGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCT 40762 || || | ||| || || | || || ||||| ||||||| ||| |||| | ||| Sbjct 273 GAAGTGAACCAGATACCTACTACAGGCCAAGCAGCCAAGAA-GAAATGTAAAGAACGAGA 331 Query 40763 ATTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGAT 40822 ||||||||| ||||||||| || |||| || ||||| ||||| || |||||||| || Sbjct 332 ATTGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCTACAAT 391 Query 40823 GTTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGT 40882 |||||||| || || || ||||| || | || || | || || || |||| || Sbjct 392 ATTATAAGTTTCTCCCTCTTGACCGAATCTGTAACCTTCATTAGCAGACTCGTTTTCAGT 451 Query 40883 GGTCTCCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGC 40939 ||| |||| || | | |||| || ||||| || ||||||||| || | | Sbjct 452 GGTTTCCCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGA 508 Query 40940 ACCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTC 40999 || || || || || || || || | ||| || ||||| ||||| || |||||||| || Sbjct 509 GCCGCCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTC 568 Query 41000 TGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGA 41059 ||| ||||| |||| ||| |||||||| || ||| |||||||||||||||||||||||| Sbjct 569 TGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGA 628 Query 41060 GAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGC 41119 |||| || ||||| | || || | ||||| ||||| ||| |||| | ||||| Sbjct 629 GAAACTTCCTTGACCAATAGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGC 688 Query 41120 TGTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCT 41179 || ||||| ||| ||||| || | |||||| || | | | ||||||||||| | Sbjct 689 TGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACG 748 Query 41180 ACCAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCC 41239 ||| ||| ||||| || | ||| ||||| | ||||| || | ||| || ||||| Sbjct 749 ACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCC 808 Query 41240 GTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGAT 41299 ||||||| |||||| || | | | ||||||||||||||||| ||||| | || || Sbjct 809 ATTGTATAACCACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGCAAACCTAT 868 Query 41300 TGCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCC 41359 || ||| |||||| | || ||||| ||||||||||| || || | ||| || || Sbjct 869 AGCTGCAGAAGTCGGAATAATGGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACC 928 Query 41360 GGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTAT 41419 ||||| || || || || ||||| |||||||| || || || || || |||||||| || Sbjct 929 AGAAACAGGTTCGCGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAAT 988 Query 41420 GAA-ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGT 41478 || ||| | || || || | ||| | || ||||| | ||||| ||||| || | || Sbjct 989 AAATACA-GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCAATGT 1047 Query 41479 ATAGGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 | || || || || ||||| || | |||||| || || Sbjct 1048 AAAGACGATTTTCAGTGCTGGTTATCCAGTTGCAGAA 1084 >seq3033 Length=62413 Score = 518 bits (574), Expect = 9e-143 Identities = 718/997 (72%), Gaps = 10/997 (1%) Strand=Plus/Plus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||| ||||| ||||||||| ||||||||||| ||||| || ||||||||||||||| Sbjct 52642 TCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATTACTTCCATA 52701 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT 40643 || || | | || | | |||||||||||| ||| || ||| | | ||| Sbjct 52702 CCAAGGTTAGCACGATTGATGATATCAGCCCAAGTGTTAATAACACGACCCTGACTGTCA 52761 Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATG 40703 |||||||| ||||| || || |||||||| ||||| |||||||||||| ||||| | Sbjct 52762 ACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAA 52821 Query 40704 GAGGTAAGCCATATGCCAATAACCGGGAAAGCA-CCAAGAAAGAAGTGTAGCGCACGGCT 40762 || || | ||| || || | || || ||||| ||||||| ||| |||| | ||| Sbjct 52822 GAAGTGAACCAGATACCTACTACAGGCCAAGCAGCCAAGAA-GAAATGTAAAGAACGAGA 52880 Query 40763 ATTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGAT 40822 ||||||||| ||||||||| || |||| || ||||| ||||| || |||||||| || Sbjct 52881 ATTGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCTACAAT 52940 Query 40823 GTTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGT 40882 |||||||| || || || ||||| || | || || | || || || |||| || Sbjct 52941 ATTATAAGTTTCTCCCTCTTGACCGAATCTGTAACCTTCATTAGCAGACTCGTTTTCAGT 53000 Query 40883 GGTCTCCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGC 40939 ||| |||| || | | |||| || ||||| || ||||||||| || | | Sbjct 53001 GGTTTCCCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGA 53057 Query 40940 ACCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTC 40999 || || || || || || || || | ||| || ||||| ||||| || |||||||| || Sbjct 53058 GCCGCCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTC 53117 Query 41000 TGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGA 41059 ||| ||||| |||| ||| |||||||| || ||| |||||||||||||||||||||||| Sbjct 53118 TGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGA 53177 Query 41060 GAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGC 41119 |||| || ||||| | || || | ||||| ||||| ||| |||| | ||||| Sbjct 53178 GAAACTTCCTTGACCAATAGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGC 53237 Query 41120 TGTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCT 41179 || ||||| ||| ||||| || | |||||| || | | | ||||||||||| | Sbjct 53238 TGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACG 53297 Query 41180 ACCAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCC 41239 ||| ||| ||||| || | ||| ||||| | ||||| || | ||| || ||||| Sbjct 53298 ACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCC 53357 Query 41240 GTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGAT 41299 ||||||| |||||| || | | | ||||||||||||||||| ||||| | || || Sbjct 53358 ATTGTATAACCACTCATCAACAGATGCTGCTTCCCAGATTGGGTAAAAATGCAAACCTAT 53417 Query 41300 TGCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCC 41359 || ||| |||||| | || ||||| ||||||||||| || || | ||| || || Sbjct 53418 AGCTGCAGAAGTCGGAATAATGGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACC 53477 Query 41360 GGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTAT 41419 ||||| || || || || ||||| |||||||| || || || || || |||||||| || Sbjct 53478 AGAAACAGGTTCGCGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAAT 53537 Query 41420 GAA-ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGT 41478 || ||| | || || || | ||| | || ||||| | ||||| ||||| || | || Sbjct 53538 AAATACA-GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCAATGT 53596 Query 41479 ATAGGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 | || || || || ||||| || | |||||| || || Sbjct 53597 AAAGACGATTTTCAGTGCTGGTTATCCAGTTGCAGAA 53633 >seq559 Length=26669 Score = 464 bits (514), Expect = 2e-126 Identities = 698/989 (71%), Gaps = 2/989 (0%) Strand=Plus/Plus Query 40528 CAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTA 40587 ||||||||||||||||||| || || ||||| ||||| || ||||| ||||||||||| | Sbjct 22380 CAGAAGCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAA 22439 Query 40588 GACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTA 40647 | | | |||| || ||||||||| ||| ||| || ||| | | || |||| Sbjct 22440 GGTTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTA 22499 Query 40648 CTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGG 40707 | || ||||| || || |||||||| | ||| ||||||||||| ||||| | | || Sbjct 22500 CAGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGG 22559 Query 40708 TAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGT 40767 | | ||| || || | || || |||| | || ||||| |||| | ||| ||||| Sbjct 22560 TGAACCAGATACCTACTACAGGCCAAGCCGCTAGGAAGAAATGTAAAGAACGAGAATTGT 22619 Query 40768 TGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTAT 40827 |||| ||||||||| || || | || ||||| ||||| || ||||||||||| |||| Sbjct 22620 TGAAACTAGCATATTGGAAAATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTAT 22679 Query 40828 AAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCT 40887 |||| || | || ||||| || | || || | ||| |||||| |||| ||||| | Sbjct 22680 AAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTT 22739 Query 40888 CCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAA 40947 ||| || | ||||| || | | || ||||||||| || | || ||| || | Sbjct 22740 CCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGAGAACCGCCGA 22799 Query 40948 AGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGA 41007 | || || || || || | ||| || ||||||||||| || |||||||| || || |||| Sbjct 22800 ATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 22859 Query 41008 AGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAAC 41067 | |||| |||||||||||| || ||| || |||| ||||||||| ||||| || | Sbjct 22860 ATACAATCATGAAGTTGAAAGTACCAGAAATCCCTAGAGGCATACCGTCAGAAAAGCTTC 22919 Query 41068 CCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATG 41127 | ||||| | ||||| | ||||| || || || || | | |||||||| |||| Sbjct 22920 CTTGACCAATGGGATATATCAAGAAAACGGCAGTTGCAGCAGCAACTGGAGCTGAATATG 22979 Query 41128 CCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGT 41187 | ||| ||||| || | |||||| || | | | ||||||||||| | ||| | Sbjct 22980 CAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATAT 23039 Query 41188 ATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATA 41247 | ||||| || | ||| ||||| | ||||| || | ||| || ||||| ||||||| Sbjct 23040 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATA 23099 Query 41248 GCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAG 41307 ||| || || | | | |||||||| |||||||| || || | || || || || Sbjct 23100 ACCATTCATCAACGGAAGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAG 23159 Query 41308 AGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGG 41367 | | |||| | || ||||| |||||||| || ||||| | || || || ||||| | Sbjct 23160 AAGTAGGAATAATGGCACCAGAAATAATATTATTTCCGTAAAGTAGAGATCCAGAAACAG 23219 Query 41368 GCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACAT 41426 | ||||| || ||||| ||||| || || || || || || || || || || || ||| Sbjct 23220 GTTCACGAATACCATCAATATCCACCGGAGGAGCAGCAATGAAAGCAATAATAAATACA- 23278 Query 41427 GTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGG 41486 | || || || | ||| | || ||||| | || |||||||| || | ||| || ||| Sbjct 23279 GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACGCCAAACCATCCAATGTAAAGACGG 23338 Query 41487 TTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 || || ||||| || | ||||||||| || Sbjct 23339 TTTTCAGTGCTGGTTATCCAGTTACAGAA 23367 >seq488 Length=28536 Score = 464 bits (514), Expect = 2e-126 Identities = 698/989 (71%), Gaps = 2/989 (0%) Strand=Plus/Plus Query 40528 CAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTA 40587 ||||||||||||||||||| || || ||||| ||||| || ||||| ||||||||||| | Sbjct 22435 CAGAAGCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAA 22494 Query 40588 GACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTA 40647 | | | |||| || ||||||||| ||| ||| || ||| | | || |||| Sbjct 22495 GGTTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTA 22554 Query 40648 CTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGG 40707 | || ||||| || || |||||||| | ||| ||||||||||| ||||| | | || Sbjct 22555 CAGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGG 22614 Query 40708 TAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGT 40767 | | ||| || || | || || |||| | || ||||| |||| | ||| ||||| Sbjct 22615 TGAACCAGATACCTACTACAGGCCAAGCCGCTAGGAAGAAATGTAAAGAACGAGAATTGT 22674 Query 40768 TGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTAT 40827 |||| ||||||||| || || | || ||||| ||||| || ||||||||||| |||| Sbjct 22675 TGAAACTAGCATATTGGAAAATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTAT 22734 Query 40828 AAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCT 40887 |||| || | || ||||| || | || || | ||| |||||| |||| ||||| | Sbjct 22735 AAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTT 22794 Query 40888 CCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAA 40947 ||| || | ||||| || | | || ||||||||| || | || ||| || | Sbjct 22795 CCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGAGAACCGCCGA 22854 Query 40948 AGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGA 41007 | || || || || || | ||| || ||||||||||| || |||||||| || || |||| Sbjct 22855 ATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 22914 Query 41008 AGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAAC 41067 | |||| |||||||||||| || ||| || |||| ||||||||| ||||| || | Sbjct 22915 ATACAATCATGAAGTTGAAAGTACCAGAAATCCCTAGAGGCATACCGTCAGAAAAGCTTC 22974 Query 41068 CCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATG 41127 | ||||| | ||||| | ||||| || || || || | | |||||||| |||| Sbjct 22975 CTTGACCAATGGGATATATCAAGAAAACGGCAGTTGCAGCAGCAACTGGAGCTGAATATG 23034 Query 41128 CCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGT 41187 | ||| ||||| || | |||||| || | | | ||||||||||| | ||| | Sbjct 23035 CAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATAT 23094 Query 41188 ATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATA 41247 | ||||| || | ||| ||||| | ||||| || | ||| || ||||| ||||||| Sbjct 23095 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATA 23154 Query 41248 GCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAG 41307 ||| || || | | | |||||||| |||||||| || || | || || || || Sbjct 23155 ACCATTCATCAACGGAAGCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAG 23214 Query 41308 AGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGG 41367 | | |||| | || ||||| |||||||| || ||||| | || || || ||||| | Sbjct 23215 AAGTAGGAATAATGGCACCAGAAATAATATTATTTCCGTAAAGTAGAGATCCAGAAACAG 23274 Query 41368 GCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACAT 41426 | ||||| || ||||| ||||| || || || || || || || || || || || ||| Sbjct 23275 GTTCACGAATACCATCAATATCCACCGGAGGAGCAGCAATGAAAGCAATAATAAATACA- 23333 Query 41427 GTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGG 41486 | || || || | ||| | || ||||| | || |||||||| || | ||| || ||| Sbjct 23334 GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACGCCAAACCATCCAATGTAAAGACGG 23393 Query 41487 TTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 || || ||||| || | ||||||||| || Sbjct 23394 TTTTCAGTGCTGGTTATCCAGTTACAGAA 23422 >seq7 Length=14728688 Score = 150 bits (166), Expect = 5e-32 Identities = 225/314 (72%), Gaps = 4/314 (1%) Strand=Plus/Minus Query 41204 TAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGT 41263 ||| ||||| | ||||| || | ||| || ||||| ||| ||| |||||| || | | Sbjct 2867819 TAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGCATAACCACTCATCAACAGA 2867760 Query 41264 GCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGC 41323 | ||||||||||||||||| ||||| | || || || ||| |||||| | || Sbjct 2867759 TGCTGCTTCCCAGATTGGGTAAAAATGCAAACCTATAGCTGCAGAAGTCGGAATAATGGC 2867700 Query 41324 TCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATC 41383 ||||| ||||||||||| || || | ||| || || ||||| || || || || ||||| Sbjct 2867699 ACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGTTCGCGAATACCATC 2867640 Query 41384 TATATCTACAGGCGGTGC-TGCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGT 41441 |||||||| || || || || || |||||||| || || ||| | || | || | | Sbjct 2867639 AATATCTACTGGAGGAGCAAGCAATGAAGGCGATAATAAATACA-GAAGTTG-GGTCAAT 2867582 Query 41442 AATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGTG 41501 || | || ||||| | ||||| ||||| || | ||| || || || || ||||| || Sbjct 2867581 AAGGTAGGGATCATCAAAACACCGAACCATCCAATGTAAAGACGATTTTCAGTGCTGGTT 2867522 Query 41502 ACCCAGTTACAAAA 41515 | |||||| || || Sbjct 2867521 ATCCAGTTGCAGAA 2867508 >seq5 Length=15024279 Score = 113 bits (124), Expect = 1e-20 Identities = 140/186 (75%), Gaps = 7/186 (4%) Strand=Plus/Minus Query 41243 GTATAGCCACTCGTC--CAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATT 41300 |||||||||||| || ||| ||| | ||||| ||||||| |||||||| | || || Sbjct 14840522 GTATAGCCACTCATCAGCAGA-TGCTG-CTTCC-AGATTGGATAGAAATGCAAACCTATG 14840466 Query 41301 GCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCG 41360 || ||| |||||| | || ||||| ||||||||||| ||||| | ||| || || Sbjct 14840465 GCTGCAGAAGTCGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAGAACCC 14840406 Query 41361 GAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATG 41420 ||||| | ||||| || ||||| |||||||| || || | || |||||| |||| || Sbjct 14840405 GAAACAAGTTCACGAATACCATCAATATCTACCGGAGGAGTAGCAATAAAG--GATTGTG 14840348 Query 41421 AAACAT 41426 |||||| Sbjct 14840347 AAACAT 14840342 >seq18 Length=10911977 Score = 89.7 bits (98), Expect = 1e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 40917 CCGTGCATAGCAGCAAACAAAGCACCACCAAAGACGCCTGCAACGCCGAGCATATGGAAT 40976 || ||||||||| || | | || || || || || || || || | ||| | ||| Sbjct 6706347 CCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACACCTAACATGAGAAAT 6706406 Query 40977 GGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTG 41036 | ||| | | || ||||||| | ||||||| |||| ||| |||||||| || | | | Sbjct 6706407 AGATGCGTATGGATATTGTGTTTTACTTGGAATACAATCATAAAGTTGAAAGTACTAGAG 6706466 Query 41037 ATTCCTAAAGGCATACCATCAGAGAAA 41063 ||||||||||||||||||| ||||||| Sbjct 6706467 ATTCCTAAAGGCATACCATGAGAGAAA 6706493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143697060467886