Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 3e-13 >seq3 Length=16781886 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| |||| ||| | || | ||| || || || || || ||||| || | | Sbjct 16131926 CGAAGAACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTACTCTGATAAGGTCCGGCCA 16131867 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || ||||| || || ||||| || | | ||| ||||| ||| | ||||||||||| Sbjct 16131866 TCCTCCAATTGCTTCCCAGCAAATATGAGCCGCTGCTGATCGGGAAGGATTCCTTCTTTG 16131807 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||| || | ||| ||| || || || |||||| || ||||| || Sbjct 16131806 TCTTGAATTTTACCCTTCAGGTTTTCAATTGTGTCAGAGCTCTCAACCTCGAGAGTGATG 16131747 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || ||||| || ||||| Sbjct 16131746 GTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCAT 16131712 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| |||| ||| | || | ||| || || || || || ||||| || | | Sbjct 16199730 CGAAGAACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTACTCTGATAAGGTCCGGCCA 16199671 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || ||||| || || ||||| || | | ||| ||||| ||| | ||||||||||| Sbjct 16199670 TCCTCCAATTGCTTCCCAGCAAATATGAGCCGCTGCTGATCGGGAAGGATTCCTTCTTTG 16199611 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||| || | ||| ||| || || || |||||| || ||||| || Sbjct 16199610 TCTTGAATTTTACCCTTCAGGTTTTCAATTGTGTCAGAGCTCTCAACCTCGAGAGTGATG 16199551 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || ||||| || ||||| Sbjct 16199550 GTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCAT 16199516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899619212267280