Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 1e-14 seq3 86.0 6e-12 >seq5 Length=15024279 Score = 95.1 bits (104), Expect = 1e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 151099 AAATGCATCGGCCAAACCTTGAATGCCTATGCCGATGGGACGATGGCGCATATTAGAttt 151158 ||||| ||| || || || |||| ||||||||||| || ||||| || ||||| ||| | Sbjct 11651937 AAATGTATCTGCTAAGCCCTGAACTCCTATGCCGATTGGTCGATGCCGTATATTTGATCT 11651878 Query 151159 ttttGCAGTTTCAATAGGGTAGAAATTGCGATCAATAATTTTATT 151203 |||||| ||||||| || || |||||| |||||| |||||||| Sbjct 11651877 TTTTGCGGTTTCAACTGGATAAAAATTGACATCAATTATTTTATT 11651833 >seq3 Length=16781886 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || ||||| |||||||| || | ||||| ||| ||||||||||||||| Sbjct 16131224 GTTGACTCCTTTTGGATGTTGTACTCTGAGAGTGTGCGGCCGTCCTCGAGTTGTTTACCA 16131165 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| |||| || | ||||| || ||||| ||||| || ||||| || || || Sbjct 16131164 GCAAAGATAAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTC 16131105 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | ||| | ||||| | | || || || | ||| | ||||||||||| | || Sbjct 16131104 ACATTTTCAATTGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTCTTGCCGGTGAGAGTC 16131045 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| || ||||| Sbjct 16131044 TTCACGAAGATCTGCAT 16131028 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || ||||| |||||||| || | ||||| ||| ||||||||||||||| Sbjct 16199028 GTTGACTCCTTTTGGATGTTGTACTCTGAGAGTGTGCGGCCGTCCTCGAGTTGTTTACCA 16198969 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| |||| || | ||||| || ||||| ||||| || ||||| || || || Sbjct 16198968 GCAAAGATAAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTC 16198909 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | ||| | ||||| | | || || || | ||| | ||||||||||| | || Sbjct 16198908 ACATTTTCAATTGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTCTTGCCGGTGAGAGTC 16198849 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| || ||||| Sbjct 16198848 TTCACGAAGATCTGCAT 16198832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488524891822800