Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq22 89.7 1e-12 >seq22 Length=10398566 Score = 89.7 bits (98), Expect = 1e-12 Identities = 120/163 (74%), Gaps = 8/163 (5%) Strand=Plus/Plus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||||| || ||| | || || || || ||||||||||| |||| |||| | ||| Sbjct 7935685 GTTCTTTTTAATCGTCAGCCTAGTCTCCACAAAATGTCTATTATGGGTCATCGCATTAAA 7935744 Query 305390 GTATTAT--CTGGATTGACATTTCGATTAAA--TGTAAGTGCTTGTACGCCTTATAATGC 305445 ||||| | | || || || || || ||| ||| | | ||||||||||||| Sbjct 7935745 --ATTATGCCATACTCAACTTTCCGGTTGAACTTGTCAGT--TACTTCGCCTTATAATGC 7935800 Query 305446 GGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 ||||||||||||||||||||||| |||||||| ||||||||| Sbjct 7935801 TGATTTTGATGGAGATGAAATGAACATGCATGTCCCTCAATCA 7935843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186765220303969