Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq7 98.7 7e-16 seq12 93.3 3e-14 >seq7 Length=14728688 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || ||| || ||||| |||||||| |||| ||| ||||| |||| || | || Sbjct 13849630 ATGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTG 13849571 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || ||||| || || | |||||||||||| | || | || || ||||| || || Sbjct 13849570 CTTCCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATCCCCTCCTTGTCCTGGATCTT 13849511 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 ||| |||| ||| | ||||||| ||||| |||| |||||||| || || | Sbjct 13849510 GGCCTTC-ACATTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATCGTCTTCCCCG 13849452 Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750 ||| ||||| || |||||||||||| Sbjct 13849451 TTAGGGTTTTCACGAAGATCTGCATA 13849426 >seq12 Length=12612916 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| || | || ||||| |||| ||||| || || ||||| || Sbjct 12401206 CTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAA 12401147 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||| ||||||||| || |||| | || || ||||| ||||| || | ||||| Sbjct 12401146 GATCAGACGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATTTT-TGCCTTAACAT 12401088 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||||||| || || || || | ||||| || || || || | || || | Sbjct 12401087 TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGA 12401028 Query 33737 CAAAGATCTGCAT 33749 | ||||||||||| Sbjct 12401027 CGAAGATCTGCAT 12401015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328691464975680