Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14]
3,129 sequences; 382,055,938 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq3 84.2 2e-11
>seq3
Length=16781886
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | |||||||| || | |||||||| | ||||| | || || || | |
Sbjct 16199060 ATGCAAATCTTTGTAAAGACTCTCACCGGAAAGACCATCACCTTGGAGGTTGAGAGCTCC 16199119
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || || || || || || ||||| || || | ||||||
Sbjct 16199120 GACACGATCGAAAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCTCGGATCAG 16199179
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGAT-AGA-AATGTCAGCGATTACA 25352
||||| ||||| | | |||||||||||||| || | | | | ||||| || ||||
Sbjct 16199180 CAAAGGCTCATCTTTGCAGGCAAACAACTCGAGGACGGTCACACTCTGTCA--GACTACA 16199237
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| |||| |||||||| ||| |||| | || || | ||||||| ||
Sbjct 16199238 ATGTTCAGAAAGAATCAACCCTTCACCTCGTCCTACGTCTGAGAGGTGG 16199286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445076991245280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |