Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=16781886 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||| || | |||||||| | ||||| | || || || | | Sbjct 16199060 ATGCAAATCTTTGTAAAGACTCTCACCGGAAAGACCATCACCTTGGAGGTTGAGAGCTCC 16199119 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || || || || || ||||| || || | |||||| Sbjct 16199120 GACACGATCGAAAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCTCGGATCAG 16199179 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGAT-AGA-AATGTCAGCGATTACA 25352 ||||| ||||| | | |||||||||||||| || | | | | ||||| || |||| Sbjct 16199180 CAAAGGCTCATCTTTGCAGGCAAACAACTCGAGGACGGTCACACTCTGTCA--GACTACA 16199237 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || |||| |||||||| ||| |||| | || || | ||||||| || Sbjct 16199238 ATGTTCAGAAAGAATCAACCCTTCACCTCGTCCTACGTCTGAGAGGTGG 16199286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445076991245280