Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq3 125 4e-24 seq8 122 5e-23 seq7 113 3e-20 seq12 96.9 2e-15 seq13 91.5 9e-14 seq1443 89.7 3e-13 >seq3 Length=16781886 Score = 125 bits (138), Expect = 4e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 |||||||| || || | || | ||||| || ||||||||| ||||| || ||||| Sbjct 16131254 CCGCCTCTGAGGCGAAGGACGAGGTGGAGGGTTGACTCCTTTTGGATGTTGTACTCTGAG 16131195 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || |||| || ||||||||||| ||||| || | | ||| |||||||| || Sbjct 16131194 AGTGTGCGGCCGTCCTCGAGTTGTTTACCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGA 16131135 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | ||||||||||| |||||| || | | ||||||||| |||||| || Sbjct 16131134 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTTTCAATTGTGTCGGAGCTCTCAACC 16131075 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || || ||||| | || ||||| || |||||||| Sbjct 16131074 TCCAAAGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 16131028 Score = 125 bits (138), Expect = 4e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 |||||||| || || | || | ||||| || ||||||||| ||||| || ||||| Sbjct 16199058 CCGCCTCTGAGGCGAAGGACGAGGTGGAGGGTTGACTCCTTTTGGATGTTGTACTCTGAG 16198999 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || |||| || ||||||||||| ||||| || | | ||| |||||||| || Sbjct 16198998 AGTGTGCGGCCGTCCTCGAGTTGTTTACCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGA 16198939 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | ||||||||||| |||||| || | | ||||||||| |||||| || Sbjct 16198938 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTTTCAATTGTGTCGGAGCTCTCAACC 16198879 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || || ||||| | || ||||| || |||||||| Sbjct 16198878 TCCAAAGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 16198832 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||| | || | ||||||||| || || |||| || ||||| || Sbjct 16131710 CCCCCTCTCAAACGGAGAACAAGATGGAGAGTTGATTCTTTCTGAACATTGTAATCGGAC 16131651 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | |||| || ||||| || || ||||| || | | ||| ||||| | || Sbjct 16131650 AGAGTTCTCCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGAGGGG 16131591 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| ||||| || ||| | |||||| || | |||| || Sbjct 16131590 ATGCCTTCCTTGTCC-TGAATTTTTGCCTTGACGTTCTCAATTGTATCAGAGGTCTCAAC 16131532 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| ||||| || || ||||| | || || ||||||||||||||| Sbjct 16131531 CTCCAGAGTTATGGTCTTTCCGGTAAGGGTCTTGACAAAAATCTGCATG 16131483 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||| | || | ||||||||| || || |||| || ||||| || Sbjct 16199514 CCCCCTCTCAAACGGAGAACAAGATGGAGAGTTGATTCTTTCTGAACATTGTAATCGGAC 16199455 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | |||| || ||||| || || ||||| || | | ||| ||||| | || Sbjct 16199454 AGAGTTCTCCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGAGGGG 16199395 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| ||||| || ||| | |||||| || | |||| || Sbjct 16199394 ATGCCTTCCTTGTCC-TGAATTTTTGCCTTGACGTTCTCAATTGTATCAGAGGTCTCAAC 16199336 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| ||||| || || ||||| | || || ||||||||||||||| Sbjct 16199335 CTCCAGAGTTATGGTCTTTCCGGTAAGGGTCTTGACAAAAATCTGCATG 16199287 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || ||| ||||||||| ||||| || ||||| | || || | || || Sbjct 16131920 ACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTACTCTGATAAGGTCCGGCCATCCTCC 16131861 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||| || || |||||||| | ||||| || || || | | ||| || |||||| || Sbjct 16131860 AATTGCTTCCCAGCAAATATGAGCCGCTGCTGATCGGGAAGGATTCCTTCTTTGTCT-TG 16131802 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||| || | | | ||||||||| |||||| || || | || || || || Sbjct 16131801 AATTTTACCCTTCAGGTTTTCAATTGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTT 16131742 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | || ||||||||||||||||| Sbjct 16131741 TCCAGTGAGGGTCTTCACAAAAATCTGCAT 16131712 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || ||| ||||||||| ||||| || ||||| | || || | || || Sbjct 16199724 ACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTACTCTGATAAGGTCCGGCCATCCTCC 16199665 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||| || || |||||||| | ||||| || || || | | ||| || |||||| || Sbjct 16199664 AATTGCTTCCCAGCAAATATGAGCCGCTGCTGATCGGGAAGGATTCCTTCTTTGTCT-TG 16199606 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||| || | | | ||||||||| |||||| || || | || || || || Sbjct 16199605 AATTTTACCCTTCAGGTTTTCAATTGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTT 16199546 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | || ||||||||||||||||| Sbjct 16199545 TCCAGTGAGGGTCTTCACAAAAATCTGCAT 16199516 >seq8 Length=13970067 Score = 122 bits (134), Expect = 5e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| ||||| ||||||||||| |||| ||| || || |||| || || || Sbjct 10823976 TGGAGGGTGGATTCCTTCTGAATGTTATAGTCTGCAAGGGTGCGGCCGTCCTCGAGCTGC 10824035 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || ||||| || || ||||| ||||| || || | ||||||||||| |||| || Sbjct 10824036 TTGCCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATC-TT 10824094 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || ||||| ||||||||| || | ||| || || || ||||| Sbjct 10824095 GGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCGGT 10824154 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | |||||||||||||||||||| Sbjct 10824155 GAGGGTTTTCACAAAAATCTGCAT 10824178 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| || | ||| | || | ||||| ||| |||||||||||||||||| || | | Sbjct 10823496 CCGCCCCTCAAACGAAGAACAAGGTGGAGGGTGGACTCCTTTTGAATGTTATAGTCGGCA 10823555 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || || || || || || | ||||| |||||||| || Sbjct 10823556 AGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 10823615 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| || | ||| ||| || ||| ||||| ||| || || Sbjct 10823616 ATGCCCTCCTTGTC-CTGAATCTTCGCTTTCACGTTATCAATGGTGTCCGAGCTTTCAAC 10823674 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | ||| || || || || || | || |||||||| ||||||||| Sbjct 10823675 CTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 10823723 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || || | |||||| | ||||| ||| ||| || || ||||| ||||| | Sbjct 10823723 GCCCCCCCTCAGCCTCAACACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCCGC 10823782 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 |||||| || | || || || || || ||||| || || | |||||| || ||||| || Sbjct 10823783 AAGTGTGCGGCCATCCTCGAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGATCCGGGGG 10823842 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCA 34657 | |||||||| || ||||| | || || || || ||||| |||||||| Sbjct 10823843 AATGCCCTCCTTATCCTGAATCTTG-GCCTTGACATTATCGATGGTGTCGGAGCTCTCCA 10823901 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | ||| || || ||||| || | || ||||| |||||||||||| Sbjct 10823902 CCTCAAGGGTAATAGTCTTACCCGTGAGGGTCTTCACGAAAATCTGCATG 10823951 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| || ||||| ||||| | || || || | || ||||| || || || || || Sbjct 10823304 TCCTTCTGGATGTTGTAATCCGCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCGAAG 10823363 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || |||||||| ||||||||||| | ||||||||||| ||| || | || || | Sbjct 10823364 ATCAAACGCTGCTGGTCCGGCGGAATCCCCTCCTTGTC-CTGAATCTTAGCCTTCACATT 10823422 Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | ||| || || |||||| || |||| ||| ||||| || ||||| | || || || Sbjct 10823423 ATCAATAGTATCGGAGCTCTCAACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGAC 10823482 Query 34695 AAAAATCTGCAT 34706 ||| || ||||| Sbjct 10823483 AAAGATTTGCAT 10823494 >seq7 Length=14728688 Score = 113 bits (124), Expect = 3e-20 Identities = 168/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | ||| | ||||| || |||||| || ||||| || || | Sbjct 13849425 CCGCCGCGGAGACGGAGCACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 13849366 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| |||| || || || || ||||| || || | ||||| || ||||| || Sbjct 13849365 AGGGTTCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGATCCGGGGGA 13849306 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | |||||| | || ||||| ||||||||| Sbjct 13849305 ATCCCCTCCTTGTCCTGGATC-TTGGCCTTAACGTTGTCGATGGTGTCGGAGCTCTCCAC 13849247 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCA--TGTTGA 34711 || | ||| ||||| || ||||| | |||||||| || ||||||| |||||| Sbjct 13849246 CTCGAGGGTGATCGTCTTTCCGGTGAGGGTTTTCACGAAGATCTGCATCTGTTGA 13849192 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | || | ||| || ||| |||||||| ||||| || || | Sbjct 13849653 CCGCCGCGGAGACGGAGGACAAGATGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCG 13849594 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || || || || ||||| || || | |||||| || ||||| || Sbjct 13849593 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 13849534 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || | || ||||| ||||||||| Sbjct 13849533 ATCCCCTCCTTGTCCTGGATC-TTGGCCTTCACATTGTCGATGGTGTCGGAGCTCTCCAC 13849475 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| ||||| || || |||| |||||||| || |||||||| Sbjct 13849474 CTCAAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 13849427 Score = 91.5 bits (100), Expect = 9e-14 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| ||||| || ||||| || || | || || || |||| || || || Sbjct 13850085 TGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGC 13850026 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | |||||| |||||||| || | ||||||||||| |||| || Sbjct 13850025 TTCCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATC-TT 13849967 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || ||||| |||||| || || | ||| ||||| || || || Sbjct 13849966 GGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTCCCCGT 13849907 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || || || || || |||||||| Sbjct 13849906 TAGGGTCTTGACGAAGATCTGCAT 13849883 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| || ||||| || || | || || || |||| || || || ||||| ||||| Sbjct 13850301 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCTGCAAAG 13850242 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | |||||| |||||||| || | ||||||||||| |||| || | || || | Sbjct 13850241 ATCAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGGATC-TTCGCCTTGACATT 13850183 Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 || ||||| |||||| || || | ||| ||||| || ||||| | || || || Sbjct 13850182 GTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTGAC 13850123 Query 34695 AAAAATCTGCATG 34707 || ||||||||| Sbjct 13850122 GAAGATCTGCATG 13850110 >seq12 Length=12612916 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||| || | |||| ||||| || ||||| || ||||| || || | Sbjct 12401470 GCCACCGCGAAGGCGGAGAACCAGGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCCGC 12401411 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||| || | || |||||||| || || | ||||| |||||||| || Sbjct 12401410 CAGAGTGCGGCCGTCCTCCAACTGCTTACCGGCGAAGATGAGCCGCTGCTGGTCCGGTGG 12401351 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | ||| ||| | || ||||| |||||||| Sbjct 12401350 GATGCCCTCCTTGTCCTGGATC-TTAGCTTTGACGTTGTCGATCGTGTCGGAGCTCTCCA 12401292 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | ||| || || || ||||| | || ||||| || ||||||||| Sbjct 12401291 CCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 12401242 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | ||| | ||||| || |||||| || ||||| || || | Sbjct 12401242 GCCGCCACGGAGACGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 12401183 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||| || | || || ||||| || || | |||||| ||||||||||| Sbjct 12401182 CAGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 12401123 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| ||| ||||| ||||| | || ||||| | ||| | Sbjct 12401122 GATCCCCTCCTTGTCCTGGAT-TTTTGCCTTAACATTGTCGATGGTGTCGGAGGACTCGA 12401064 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | ||| || || || ||||| | || || || || ||||||||| Sbjct 12401063 CCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATG 12401014 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | ||| | ||||| || |||||| || ||||| || |||| Sbjct 12401014 GCCGCCACGGAGACGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCTGC 12400955 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || |||| || | || || ||||| || || || ||||| |||||||| || Sbjct 12400954 AAGAGTCCGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAACCGCTGCTGGTCCGGGGG 12400895 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| ||| ||| | || || | || ||||| | ||| | Sbjct 12400894 GATCCCCTCCTTGTCCTGGAT-TTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGA 12400836 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | ||| || || || ||||| | || || || || ||||||||| Sbjct 12400835 CCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATG 12400786 >seq13 Length=11759267 Score = 91.5 bits (100), Expect = 9e-14 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| || |||||| || ||||| || || | || |||| | |||| || || || Sbjct 11348162 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCTAGGGTTCTCCCGTCCTCGAGCTGC 11348103 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || || || || | ||||| || ||||| || | ||||||||||| |||| || Sbjct 11348102 TTCCCCGCGAAGATGAGGCGCTGCTGATCCGGGGGGATCCCCTCCTTGTCCTGGATC-TT 11348044 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || ||||| | |||||| |||| ||| ||||| || || || Sbjct 11348043 CGCCTTCACGTTGTCGATCGTGTCCGAGGACTCCACCTCCAGGGTGATCGTCTTCCCCGT 11347984 Query 34683 TAACGTTTTCACAAAAATCTGCATGTT 34709 || |||||||| || |||||||| || Sbjct 11347983 TAGGGTTTTCACGAAGATCTGCATCTT 11347957 >seq1443 Length=10899 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| || ||||| || || | || || || |||| || | || ||||||||||| Sbjct 7988 TCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCGTCCTCCAACTGCTTACCGGCAAAG 8047 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | ||||| ||||||||||| | ||||||||||| |||| || | ||| ||| | Sbjct 8048 ATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATC-TTAGCTTTGACGTT 8106 Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 || ||||| | ||| || || | ||| || || || ||||| | || ||||| Sbjct 8107 GTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 8166 Query 34695 AAAAATCTGCATG 34707 || ||||||||| Sbjct 8167 GAAGATCTGCATG 8179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314717597885057