Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq3129 87.8 6e-13 seq21 87.8 6e-13 seq12 87.8 6e-13 seq3 87.8 6e-13 >seq3129 Length=159636 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||||||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 38965 CGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 38906 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 38905 CTGTCTCCGCAAC 38893 >seq21 Length=10645290 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||||||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 5426579 CGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 5426638 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 5426639 CTGTCTCCGCAAC 5426651 >seq12 Length=12612916 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||||||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 11697165 CGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 11697106 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 11697105 CTGTCTCCGCAAC 11697093 >seq3 Length=16781886 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||||||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 11587083 CGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 11587142 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 11587143 CTGTCTCCGCAAC 11587155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162518761086322