Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 5e-12 >seq3 Length=16781886 Score = 86.0 bits (94), Expect = 5e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 101041 AGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCC 101100 |||||||||||| |||| ||||||||||| || |||| | || || | ||| ||||| Sbjct 16131681 AGTTGATTCTTTCTGAACATTGTAATCGGACAGAGTTCTCCCGTCCTCGAGTTGCTTGCC 16131622 Query 101101 CGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 ||| | || ||||| || |||||| ||| | |||||| ||||| ||||||| Sbjct 16131621 AGCAAAGATGAGCCTCTGCTGGTCTGAGGGGATGCCTTCCTTGTCCTGAATTTTT 16131567 Score = 86.0 bits (94), Expect = 5e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 101041 AGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCC 101100 |||||||||||| |||| ||||||||||| || |||| | || || | ||| ||||| Sbjct 16199485 AGTTGATTCTTTCTGAACATTGTAATCGGACAGAGTTCTCCCGTCCTCGAGTTGCTTGCC 16199426 Query 101101 CGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 ||| | || ||||| || |||||| ||| | |||||| ||||| ||||||| Sbjct 16199425 AGCAAAGATGAGCCTCTGCTGGTCTGAGGGGATGCCTTCCTTGTCCTGAATTTTT 16199371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409645177713411