Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5 131 2e-25 >seq5 Length=15024279 Score = 131 bits (144), Expect = 2e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 76753 ACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCC 76812 ||| || ||||| | ||| | ||||| | |||| | |||| || ||| |||| ||| || Sbjct 11649875 ACCCCCTTGATCAACATAACGAGCAGTATCATTAAACACTCGCAGCATAGGAACAATCCC 11649816 Query 76813 GTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGA 76872 ||||| || |||||||| ||| ||| ||||| ||| ||||||||| || |||||| Sbjct 11649815 ATTAGAAGTCCCATTTGTCCCACGAATGTAACTCCCAGTTGCACGAATGTTGTGAATAGA 11649756 Query 76873 TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGAT 76932 | || ||||||||||| ||| || | |||||| |||| || ||||| || Sbjct 11649755 AACACCAATTCCTCCTGCGGATTTGCTTATGACAGCACACTCCTTCAGAGTATCATAAAT 11649696 Query 76933 GCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 ||||| |||||||| || ||||| | |||||||||||| Sbjct 11649695 TCCCTCAATACTATCCTCTTTCATGCAGACAAGAAAACAGCT 11649654 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 ||| || ||||| || | ||| || || |||||||||||||| || || | | || Sbjct 11649133 AGTGCCAGCATTGAATAGTGTTGGGGAAGCATGAGTGAACCAACGTTGGGACATCAAATG 11649074 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 ||| ||| ||||| | || ||||| || || ||||| ||||| || | ||| | Sbjct 11649073 GTACGTTCTGATAACAGACTCGATATCATCTTTGTGGATTCCAACAGCAACTCTCATTAG 11649014 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 ||| ||||| || | |||||| ||| | | |||||| | || ||| | || | Sbjct 11649013 CATGTGCTGTGGCCTTTCTACTACCTTTCCAGAAACTTTCAAGAGATAGGATCTCTCAAG 11648954 Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||| || ||||||||||||| || |||||||| || ||||| || Sbjct 11648953 AGTCTTGAAACCAAAATAGTCATAGTCGAAGTCTCTGTCATAAATTAT 11648906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712906515353280