Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq6 102 1e-16 >seq6 Length=78779235 Score = 102 bits (112), Expect = 1e-16 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| ||| | ||||| ||||| || ||||| || ||| | ||| | || ||| Sbjct 3703310 ATGCAAATTTTTGTCAAGACCCTAACCGGAAAAACCATCACTCTGGAGGTCGAGAGCTCC 3703369 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| |||| | || || || ||||| || || || || || || || || Sbjct 3703370 -GATACTATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCA 3703428 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||||||||| || || ||||||||| | ||||| | || || | | ||||| || Sbjct 3703429 GCAAAGGCTTATCTTCGCTGGAAAACAACTCGAGGACGGCCGGACTCTGGCTGATTACAA 3703488 Query 124718 TATTCAAAAAGAATCAACTTTGCAT 124742 ||| || || ||||| ||| | ||| Sbjct 3703489 TATCCAGAAGGAATCCACTCTTCAT 3703513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755344645785600