Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq6 107 2e-18
seq3 107 2e-18
seq8 104 3e-17
seq7 86.0 7e-12
seq1 86.0 7e-12
>seq6
Length=78779235
Score = 107 bits (118), Expect = 2e-18
Identities = 141/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || ||||||||||||||||||||||| |||| || || || || ||||||||
Sbjct 3703500 TCCTTCTGGATATTGTAATCAGCCAGAGTCCGGCCGTCCTCGAGTTGTTTTCCAGCGAAG 3703441
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || | |||||||| | || | || ||||||||| ||| || |||| |
Sbjct 3703440 ATAAGCCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTA 3703381
Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169
| | || || |||| || || || | ||||||||||| || ||||| |||||
Sbjct 3703380 TCAATAGTATCGGAGCTC---TCGACCTCCAGAGTGATGGTTTTTCCGGTTAGGGTCTTG 3703324
Query 43170 ACAAAGATTTGCAT 43183
||||| ||||||||
Sbjct 3703323 ACAAAAATTTGCAT 3703310
Score = 104 bits (114), Expect = 3e-17
Identities = 156/218 (72%), Gaps = 8/218 (4%)
Strand=Plus/Minus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|| |||||| || | || |||||| ||||| ||||||||||| |||||||| | ||
Sbjct 3703750 CAGCACCAAGTGGAGGGTCGACTCCTTCTGAATGTTGTAATCAGCGAGAGTCCGGCCATC 3703691
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| || || ||||| || || ||||| | ||||||||| | || | || |||||||||
Sbjct 3703690 CTCGAGTTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 3703631
Query 43091 CATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGA 43146
||| || |||| ||| | | | ||||| |||| || || || | |||||
Sbjct 3703630 TTGGATCTTCGCCTTGA-CGTTGTCGATGGTGTCAGAGCTC---TCGACCTCCAACGTGA 3703575
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|||| ||||| || || || || || || || ||||||
Sbjct 3703574 TGGTCTTGCCGGTCAGGGTTTTGACGAAAATCTGCATT 3703537
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||||||||||||||| ||||||| | | || || |||||||| || |||||
Sbjct 3703957 CTCCTTCTGAATATTGTAATCAGCAAGAGTCCTCCCATCTTCAAGCTGCTTCCCTGCGAA 3703898
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| | | |||||| || | ||| | | |||||| ||| || || |||| |||
Sbjct 3703897 GATCAACCTCTGCTGATCCGGCGGAATCCCCTCCTTATCCTGTATCTTCGCCTTGA-CGT 3703839
Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | |||||| |||| ||||| || | ||||| || || ||||| | ||||
Sbjct 3703838 TGTCGATCGTGTCAGAGCTC---TCCACCTCCAAGGTGATCGTCTTCCCCGTCAAGGTCT 3703782
Query 43168 TTACAAAGATTTGCAT 43183
| ||||| || |||||
Sbjct 3703781 TGACAAATATCTGCAT 3703766
>seq3
Length=113259003
Score = 107 bits (118), Expect = 2e-18
Identities = 145/201 (72%), Gaps = 6/201 (3%)
Strand=Plus/Plus
Query 42986 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 43045
|||| ||||||||| |||||||||||||| || || || |||| || ||||| || ||
Sbjct 21886203 TGTGGACTCCTTTTGGATATTGTAATCAGCGAGGGTACGGCCGTCCTCAAGCTGTTTGCC 21886262
Query 43046 AGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105
|| || || |||| |||||||| | || | | |||||||||| |||||| |||
Sbjct 21886263 GGCAAAGATCAGTCTTTGCTGGTCAGGGGGGATCCCCTCCTTGTCCTGGATTTTGGCTTT 21886322
Query 43106 GAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 43162
|| | | | ||||| ||| || || |||| |||||||| ||||| || ||
Sbjct 21886323 GACATTATCAATGGTGTCAGAACTC---TCGACCTCGAGAGTGATGGTCTTGCCTGTGAG 21886379
Query 43163 CGTCTTTACAAAGATTTGCAT 43183
|| || |||||||| |||||
Sbjct 21886380 GGTTTTCACAAAGATCTGCAT 21886400
Score = 84.2 bits (92), Expect = 3e-11
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTAC 60131
|| ||| ||||||||| |||| ||||||||||||||||| |||||||||||||||||||
Sbjct 13916745 GCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGAAATACTCACCACTATACTAC 13916803
>seq8
Length=131339754
Score = 104 bits (114), Expect = 3e-17
Identities = 143/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||| || |||||||| || || || || |||| || |||||||| || || ||
Sbjct 3136030 CTCCTTTTGGATGTTGTAATCTGCTAGGGTGCGGCCGTCCTCAAGCTGCTTCCCCGCAAA 3136089
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
||||| | ||||||||| | || | | ||| |||||| ||| |||| | |||||
Sbjct 3136090 AATGAGCCTCTGCTGGTCTGGGGGGATACCCTCTTTGTCC-TGAATTTTGGCTTTGACAT 3136148
Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | ||||| |||| || || || | |||||||||||||| || || ||||
Sbjct 3136149 TGTCGATTGTGTCAGAGCTC---TCGACCTCAAGGGTGATGGTTTTGCCAGTCAGTGTCT 3136205
Query 43168 TTACAAAGATTTGCAT 43183
| || ||||| |||||
Sbjct 3136206 TAACGAAGATCTGCAT 3136221
Score = 102 bits (112), Expect = 9e-17
Identities = 151/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
||| | ||| | ||| ||||||||| || ||||| || || ||||| || | || ||
Sbjct 3136240 CACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCGAGAGTACGACCATCCTC 3136299
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
|||||||| || || || || || | ||||||||| | || | || ||||||||||
Sbjct 3136300 AAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 3136359
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150
|||||| |||| | | | ||||| |||| || || || | |||||||||
Sbjct 3136360 GATTTTGGCCTTGACATTGTCGATTGTGTCAGAGCTC---TCAACCTCAAGCGTGATGGT 3136416
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||||| || | ||||| ||||| || |||||
Sbjct 3136417 TTTGCCGGTCAAGGTCTTGACAAAAATCTGCAT 3136449
Score = 100 bits (110), Expect = 3e-16
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| ||||||| ||| | || | ||| | || ||||||||| || || || |||||
Sbjct 3136451 CCACCTCTTAGACGAAGGACAAGATGGAGGGTCGACTCCTTTTGGATGTTATAGTCAGCA 3136510
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || |||||||| ||||| || ||||| | ||||||||| | ||
Sbjct 3136511 AGGGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGGTCCGGGGGG 3136570
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTCC 43133
| || |||||||||| |||||| |||| | | | |||||| ||| ||
Sbjct 3136571 ATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATTGTGTCGGAGCTC---TCG 3136627
Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || | ||||||||||| || || | ||||| ||||| || |||||
Sbjct 3136628 ACCTCAAGGGTGATGGTTTTTCCTGTCAAGGTCTTGACAAAAATCTGCAT 3136677
Score = 100 bits (110), Expect = 3e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || || || || || |||| || |||||||| || |||||
Sbjct 122668994 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCGAGCTGCTTTCCCGCGAA 122669053
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||| | || | | ||||||||| ||| || |||| |
Sbjct 122669054 AATGAGGCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATT 122669113
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||| || || || |||| |||||||| ||||| || || || || ||
Sbjct 122669114 GTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTGAC 122669173
Query 43172 AAAGATTTGCATTTT 43186
||||| ||||| ||
Sbjct 122669174 GAAGATCTGCATGTT 122669188
>seq7
Length=151357931
Score = 86.0 bits (94), Expect = 7e-12
Identities = 79/99 (80%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 60035 TAACAACAAATTAACGTTTATGAAAAATTTTCTCCTCG--GCAGGGAATCGAACCCTGGT 60092
|||||||||| || ||| | ||||| | || || || ||| ||||||||| |||
Sbjct 151195300 TAACAACAAAAAAATGTTCACGAAAATCGTAATCGCCGTTGCCGGGGATCGAACCCGGGT 151195359
Query 60093 CTCCCGCGTGACAGGCGGACATACTCACCACTATACTAC 60131
| |||||||||||||||| |||||||||||||||||||
Sbjct 151195360 CACCCGCGTGACAGGCGGGAATACTCACCACTATACTAC 151195398
Score = 84.2 bits (92), Expect = 3e-11
Identities = 69/83 (83%), Gaps = 2/83 (2%)
Strand=Plus/Plus
Query 60051 TTTATGAAAA--ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGC 60108
|||| |||| |||||| || || ||| ||||||||| |||| ||||||||||||||
Sbjct 865226 TTTAAAAAAACCATTTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGC 865285
Query 60109 GGACATACTCACCACTATACTAC 60131
|| |||||||||||||||||||
Sbjct 865286 GGGAATACTCACCACTATACTAC 865308
>seq1
Length=132393784
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
|||||| ||| || || ||| ||||||||| |||| |||||||||||||||| ||||
Sbjct 1095811 AAAAATATTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 1095752
Query 60117 TCACCACTATACTAC 60131
|||||||||||||||
Sbjct 1095751 TCACCACTATACTAC 1095737
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | || || || ||| ||||||||| |||| |||||||||||||||| ||||
Sbjct 2015033 AAAAAATATCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 2014974
Query 60117 TCACCACTATACTAC 60131
|||||||||||||||
Sbjct 2014973 TCACCACTATACTAC 2014959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571733314085760
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