Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq8 134 9e-27
seq3 113 3e-20
seq6 98.7 6e-16
seq7 82.4 5e-11
>seq8
Length=131339754
Score = 134 bits (148), Expect = 9e-27
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | ||||| ||||| | || || ||||| |||||||||||||
Sbjct 122668959 CCTCCGCGGAGGCGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 122669018
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||| || ||||||||||| ||||||||||| |||
Sbjct 122669019 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGGCGCTGCTGGTCCGGGGGG 122669078
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | || | | |||| || | || |||||
Sbjct 122669079 ATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACC 122669138
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| ||||||||||| ||||| || |||||||||||
Sbjct 122669139 TCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 122669185
Score = 100 bits (110), Expect = 2e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||| ||||| | || || ||||| ||||||||||| | || |||| | ||
Sbjct 3136694 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTACGGCCATCC 3136753
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||| |||||||||||||||| ||||||||| ||| | || |||||||||
Sbjct 3136754 TCGAGTTGCTTTCCTGCGAAAATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 3136813
Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||| || ||||| | || | | || | || | || || || | ||||| ||
Sbjct 3136814 TGGATC-TTGGCTTTGACATTGTCAATAGTGTCTGAGCTCTCCACCTCAAGGGTGATAGT 3136872
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| || || || || ||||||||||||||||||
Sbjct 3136873 CTTTCCTGTAAGTGTCTTCACAAAGATCTGCATC 3136906
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || ||||| ||||| || || | || || || || |||||||||||||
Sbjct 3136223 CCTCCACGGAGCCTTAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCG 3136282
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | |||||| || || ||||| |||| ||||||||| |||
Sbjct 3136283 AGAGTACGACCATCCTCAAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCTGGGGGA 3136342
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| || ||||||||| || ||||| ||| | || | | || | || | || |
Sbjct 3136343 ATGCCCTCCTTGTC--CTGGATTTTGGCCTTGACATTGTCGATTGTGTCAGAGCTCTCAA 3136400
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || | |||||||||||||||||| | || || ||||| ||||||||
Sbjct 3136401 CCTCAAGCGTGATGGTTTTGCCGGTCAAGGTCTTGACAAAAATCTGCAT 3136449
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || ||||| ||||| || || | || || || || ||||||||||| |
Sbjct 3135539 CCACCACGAAGCCTGAGCACAAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCT 3135598
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | |||||| |||||||| ||||||| ||||||||| |||
Sbjct 3135599 AGAGTGCGGCCATCCTCGAGCTGCTTTCCTGCGAAGATGAGCCTCTGCTGGTCCGGGGGG 3135658
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | |||||||| ||||| ||| | || | | || | ||| | || ||
Sbjct 3135659 ATTCCTTCCTTGTCCTGGATCTTGGCCTTAACATTGTCAATGGTATCCGAGCTCTCCACC 3135718
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| || || || ||||| ||||| || ||||||||
Sbjct 3135719 TCAAGAGTGATGGTCTTCCCCGTAAGAGTCTTCACGAAAATCTGCAT 3135765
Score = 86.0 bits (94), Expect = 4e-12
Identities = 136/193 (70%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| || || ||||| ||||| | || |||| | || || | |||||| || || |||
Sbjct 3136487 TCCTTTTGGATGTTATAGTCAGCAAGGGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAA 3136546
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316
||||||| ||||||||| ||| | || ||||||||| || ||||| ||| | ||
Sbjct 3136547 ATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTC--CTGGATTTTGGCCTTGACAT 3136604
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| | || | |||| ||||| || | ||||||||||| || || | || || |
Sbjct 3136605 TGTCGATTGTGTCGGAGCTCTCGACCTCAAGGGTGATGGTTTTTCCTGTCAAGGTCTTGA 3136664
Query 34377 CAAAGATCTGCAT 34389
|||| ||||||||
Sbjct 3136665 CAAAAATCTGCAT 3136677
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || |||| || || ||||| | || || || || |||||||| || |
Sbjct 3135995 CCTCCACGAAGCCGAAGAACGAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAATCTGCT 3136054
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||| || || |||||||||| ||||||||| |||
Sbjct 3136055 AGGGTGCGGCCGTCCTCAAGCTGCTTCCCCGCAAAAATGAGCCTCTGCTGGTCTGGGGGG 3136114
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | ||| ||||| || ||| ||||| | || | | || | || | |||||
Sbjct 3136115 ATACCCTCTTTGTCCTGAAT-TTTGGCTTTGACATTGTCGATTGTGTCAGAGCTCTCGAC 3136173
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||||||||| || || || || || |||||||||||
Sbjct 3136174 CTCAAGGGTGATGGTTTTGCCAGTCAGTGTCTTAACGAAGATCTGCAT 3136221
>seq3
Length=113259003
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | || || ||||| ||||||||||| | || ||| | ||
Sbjct 21885049 AGCACCAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTACGTCCATCC 21885108
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| |||||||||||| || || |||| ||| ||||| || | | |||||||||
Sbjct 21885109 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGTTGGTCCGGAGGGATCCCCTCCTTGTCC 21885168
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | |||| |||| || || |||| ||||||||
Sbjct 21885169 TGGATCTTCGCCTTCACATTGTCAATCGTGTCGGAGCTCTCCACCTCCAGGGTGATGGTC 21885228
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||||||||| || |||||||| ||||||||
Sbjct 21885229 TTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 21885260
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | |||||||||||| ||||| | || || ||||| ||||| ||||| |
Sbjct 21885490 CCTCCCCTCAGCCTCAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCG 21885549
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | ||||||||| || ||||| | || ||||||||| |||
Sbjct 21885550 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGG 21885609
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | ||||||||| ||| |||||||| | || | | || | |||| || ||
Sbjct 21885610 ATTCCCTCCTTGTCCTGGATC-TTTGCTTTCACATTGTCGATGGTGTCGGAGCTCTCCAC 21885668
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| |||||||| || || || ||||| ||||||||
Sbjct 21885669 TTCCAAAGTGATGGTCTTGCCGGTTAGGGTCTTGACAAAAATCTGCAT 21885716
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | |||||| ||||||| || | || || ||||| ||||||||||| |
Sbjct 21885718 CCTCCCCTCAGCCTGAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 21885777
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| |||| | || |||||||||||||| || ||||| |||| ||||||||| |||
Sbjct 21885778 AGGGTACGGCCATCCTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGG 21885837
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| |||| || | | || | || | || ||
Sbjct 21885838 ATGCCCTCCTTGTCCTGAATCTTGGCTTTTACATTGTCGATGGTGTCTGAGCTCTCCACT 21885897
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || ||||| ||||| || || ||||| ||||||||
Sbjct 21885898 TCAAGGGTGATAGTCTTGCCAGTGAGGGTCTTGACAAAAATCTGCAT 21885944
>seq6
Length=78779235
Score = 98.7 bits (108), Expect = 6e-16
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| || || |||||||| || | || ||| | || || | ||| ||||| |||||
Sbjct 3703044 TCCTTTTGGATGTTGTAATCCGCAAGGGTCCGGCCATCCTCAAGCTGTTTGCCAGCGAAG 3702985
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAG-ATC 34317
||||| || ||||||||| || | | |||||||| |||||| |||||| ||
Sbjct 3702984 ATGAGACGTTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGGATCTTT-GCTTTAACATT 3702926
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | || | ||||| || || | ||||| || |||||||| || ||||||||
Sbjct 3702925 GTCGATGGTGTCAGAGGATTCAACCTCGAGTGTGATTGTCTTGCCGGTTAGTGTTTTCAC 3702866
Query 34378 AAAGATCTGCATC 34390
|||||||||||||
Sbjct 3702865 AAAGATCTGCATC 3702853
Score = 98.7 bits (108), Expect = 6e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || |||||||||| || || || | || || ||||| ||||| ||||||| |
Sbjct 3703308 CCTCCACGCAGCCTCAAAACAAGATGCAGGGTTGACTCCTTCTGAATGTTATAGTCGGCC 3703249
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| |||| | || || | |||||| || || || || | || |||||||| ||
Sbjct 3703248 AAAGTACGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCCGGAGGA 3703189
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | || | ||||| |||||
Sbjct 3703188 ATGCCCTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCGACC 3703129
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||| |||||||| || || || || || ||||||||||||||
Sbjct 3703128 TCCAACGTTATGGTTTTCCCAGTCAGGGTCTTGACAAAGATCTGCAT 3703082
Score = 98.7 bits (108), Expect = 6e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || ||||||||||||| ||| | || || ||||| |||||||| || |
Sbjct 3703764 CCTCCACGAAGCCTCAGCACCAAGTGGAGGGTCGACTCCTTCTGAATGTTGTAATCAGCG 3703705
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | || || || || || ||||||| ||||||||| |||
Sbjct 3703704 AGAGTCCGGCCATCCTCGAGTTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 3703645
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | || | || | |||||
Sbjct 3703644 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGACC 3703585
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||||||| |||||||| || ||||| || || ||||||||
Sbjct 3703584 TCCAACGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAAATCTGCAT 3703538
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || |||||||| || || || || | ||| ||| ||||| || ||||| || |
Sbjct 3703537 TCCTCCACGCAGCCTGAGGACAAGATGAAGAGTGGATTCCTTCTGGATATTGTAATCAGC 3703478
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
||| ||| |||| || | || || || ||||| || |||| |||||||| ||
Sbjct 3703477 CAGAGTCCGGCCGTCCTCGAGTTGTTTTCCAGCGAAGATAAGCCTTTGCTGGTCCGGAGG 3703418
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||||| ||| | || | || | ||||| |||||
Sbjct 3703417 AATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATAGTATCGGAGCTCTCGAC 3703358
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||||||||| ||||| || || || ||||| || |||||
Sbjct 3703357 CTCCAGAGTGATGGTTTTTCCGGTTAGGGTCTTGACAAAAATTTGCAT 3703310
>seq7
Length=151357931
Score = 82.4 bits (90), Expect = 5e-11
Identities = 143/194 (74%), Gaps = 12/194 (6%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACG-GTCGTCGTCCAACTGCTTGCCTGCG-A 34256
|| ||||| ||||||||||||| ||| || ||| ||| || ||||||||| |||
Sbjct 34663097 TCCTTCTGGATGTTGTAGTCGGCCAGGGTCCGCGTCCTCG--CAGCTGCTTGCCCGCGCG 34663154
Query 34257 AAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316
||||||| ||||||||||| ||| | ||||||||| | ||| || |||| | ||
Sbjct 34663155 AAATGAG-CGCTGCTGGTCTGGGGGGGATCCCTCCTTGTCTG-GATC-TTGGCTTGACAT 34663211
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| | || | |||| || || || || | || |||| |||||| || || |||||||
Sbjct 34663212 TGTCGATGGTGTCGGAGGACTCCAC-TCTA-GGTTATGG-TTTGCC-GTTAG-GTTTTCA 34663266
Query 34377 CAAAGATCTGCATC 34390
| ||||||||||||
Sbjct 34663267 CGAAGATCTGCATC 34663280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323025569707520
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