Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq2 82.4 7e-11
>seq2
Length=84732013
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294
||||| ||||| ||||| | |||||||| | | ||| | |||||||||||| || |
Sbjct 24868674 CAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAAC 24868615
Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354
|| ||||| | ||| || ||||||| ||| || || || ||| || || |||||
Sbjct 24868614 CCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCACAAAAGCTCCCGGAGAAGAAA 24868555
Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTC 16389
|| ||||| || ||||| || | ||||| |||
Sbjct 24868554 ATCCCTTCGACGCAAGCAAAAGCGATCAATCTCTC 24868520
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294
||||| ||||| ||||| | |||||||| | | ||| | |||||||||||| || |
Sbjct 26602952 CAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAAC 26603011
Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354
|| ||||| | ||| || ||||||| ||| || || || ||| || || |||||
Sbjct 26603012 CCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCACAAAAGCTCCCGGAGAAGAAA 26603071
Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTC 16389
|| ||||| || ||||| || | ||||| |||
Sbjct 26603072 ATCCCTTCGACGCAAGCAAAAGCGATCAATCTCTC 26603106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462443825731200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |