Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 3e-13 >seq4 Length=146560859 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 248808 AGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAAT 248867 ||| || || || || | ||||| ||||||||| || |||| ||| |||||| | ||| | Sbjct 9258585 AGACTTTGATTATGACTACTTTGGTTTCAAAACTCTTGAGAGATCCTATCTCTTAAAAGT 9258644 Query 248868 TGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCA 248927 || ||| | || ||| || ||| |||||| ||||| |||| ||||| || ||||| Sbjct 9258645 CTCTGAAAAGGTTGTAGAAAGACCTCAACACATGCTGATGAGAGTTGCTGTTGGAATTCA 9258704 Query 248928 CAAGGATGACATAGA 248942 |||||| || || || Sbjct 9258705 CAAGGAAGATATTGA 9258719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073604170003456