Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 3e-15
>seq2
Length=84732013
Score = 96.9 bits (106), Expect = 3e-15
Identities = 116/155 (75%), Gaps = 2/155 (1%)
Strand=Plus/Minus
Query 14201 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 14260
|| || || ||||| ||||| ||||| || |||| | || || ||||||||||| |||
Sbjct 24868677 AAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTT 24868618
Query 14261 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGAT-CCGGAAAA 14319
|| || ||||||||||| || ||||| | ||| || || ||| | || | | ||||| ||
Sbjct 24868617 AACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCA-CAAAAGCTCCCGGAGAA 24868559
Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATC 14354
||| || || || || |||||| || || ||||
Sbjct 24868558 GAAAATCCCTTCGACGCAAGCAAAAGCGATCAATC 24868524
Score = 96.9 bits (106), Expect = 3e-15
Identities = 116/155 (75%), Gaps = 2/155 (1%)
Strand=Plus/Plus
Query 14201 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 14260
|| || || ||||| ||||| ||||| || |||| | || || ||||||||||| |||
Sbjct 26602949 AAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTT 26603008
Query 14261 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGAT-CCGGAAAA 14319
|| || ||||||||||| || ||||| | ||| || || ||| | || | | ||||| ||
Sbjct 26603009 AACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCA-CAAAAGCTCCCGGAGAA 26603067
Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATC 14354
||| || || || || |||||| || || ||||
Sbjct 26603068 GAAAATCCCTTCGACGCAAGCAAAAGCGATCAATC 26603102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482274502258560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |