Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq8 89.7 4e-13
seq6 82.4 6e-11
>seq8
Length=131339754
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||| || || || || || | || || || || || ||||| ||||||||||||||
Sbjct 3136223 CCTCCACGGAGCCTTAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCG 3136282
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || || ||| || | || || || ||| | ||||| || || || || |||
Sbjct 3136283 AGAGTACGACCATCCTCAAGCTGCTTCCCGGCAAAAATAAGCCTCTGCTGGTCTGGGGGA 3136342
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| ||| ||||| || |||| |||||| | | | |||||| | |||
Sbjct 3136343 ATGCCCTCCTTGTCCTGGATTTTGGCCTTGACATTGTCGATTGTGTCAGAGCTCTCAACC 3136402
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||| |||||| ||||||||||||| || || |||||||| |||||
Sbjct 3136403 TCAAGCGTGATGGTTTTGCCGGTCAAGGTCTTGACAAAAATCTGCAT 3136449
>seq6
Length=78779235
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||| || || || || |||| ||| || || || || || ||||||||||| || ||
Sbjct 3703764 CCTCCACGAAGCCTCAGCACCAAGTGGAGGGTCGACTCCTTCTGAATGTTGTAATCAGCG 3703705
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || | ||| || | |||||| || ||| |||| || || || || || |||
Sbjct 3703704 AGAGTCCGGCCATCCTCGAGTTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 3703645
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| ||| ||||| || || | |||||| | | | |||||| | ||||
Sbjct 3703644 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGACC 3703585
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
|| | |||||| | |||||||||| ||||| || ||||| ||||||
Sbjct 3703584 TCCAACGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAAATCTGCATT 3703537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379289482577040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |