Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq2 174 1e-38
seq6 116 3e-21
seq8 93.3 4e-14
seq3 82.4 7e-11
>seq2
Length=84732013
Score = 174 bits (192), Expect = 1e-38
Identities = 495/752 (66%), Gaps = 14/752 (2%)
Strand=Plus/Plus
Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604
|||||| ||||| | || || || ||| | |||||||| ||||| || || |||||
Sbjct 24868096 CATGTTCCCGATCAAGTACCCCTCGATCTGGGAGATGTACAAGAAGGCCGAGGCCTCGTT 24868155
Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATT---CCCTCAA 57661
||||||| ||| || || || || | ||| | || | ||||| |||| |
Sbjct 24868156 CTGGACCGCCGAGGAGGTCGATCTCAGCCAAGATATCCGCCACTGGGACCAAACCCTAAC 24868215
Query 57662 AGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTAT 57721
| ||| | | || | | ||||| | || || |||||||| ||||| || ||
Sbjct 24868216 CGCCGACGAGCGCCACTTCGTCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCAT 24868275
Query 57722 TGTTAACGAGAATTTGGTCGAAAGATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGA 57779
|| ||||| | | || | ||||| | || || || || | ||||| ||
Sbjct 24868276 CGTCCTGGAGAACCTCGCCGGCCG--TTTCATGAAGGAGGTCCAGGTCGCCGAGGCCAGG 24868333
Query 57780 TGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTC 57839
||| ||||| || || | ||||| || ||| | || || || ||||| ||||| |||
Sbjct 24868334 GCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACTCGCTTCTC 24868393
Query 57840 ATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACA 57899
|||| | ||| | |||||| ||| || || | | || || |||| ||||| ||
Sbjct 24868394 CTCGAATCCTACATCAAGGACTCCGATGAAAAGAGCCGCCTTTTTCACGCCATCGAGACC 24868453
Query 57900 ATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGC 57958
|| || ||| ||||||||||||| |||||| | | || ||||| | || | | |
Sbjct 24868454 ATCCCTTGCG-TCGCCAAGAAGGCCGAGTGGGCGCTGAAGTGGATCGATGGCTCAGAGTC 24868512
Query 57959 CACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAG 58018
||||||||||| | ||||| || || ||||||||| || ||||| || || ||
Sbjct 24868513 T---TTCGCCGAGAGATTGATCGCTTTTGCTTGCGTCGAAGGGATTTTCTTCTCCGGGAG 24868569
Query 58019 CTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAA 58078
|||| || || || ||| | || || ||||| ||||||| || | || ||| ||
Sbjct 24868570 CTTTTGTGCCATTTTCTGGCTTAAAAAGCGCGGATTGATGCCGGGGTTAACCTTTTCAAA 24868629
Query 58079 CGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCA 58138
|||| | ||||| || ||||| || |||||| ||||| || ||| | |||| ||||
Sbjct 24868630 CGAGCTCATATCTCGAGACGAAGGCCTCCATTGCGATTTCGCTTGCTTGTTGTATTCTCT 24868689
Query 58139 CATTGTCAATAAACCGACGCG-GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGA 58197
| ||| || | || ||| || | | || ||| | | || || || | |
Sbjct 24868690 GCTGAACAACAAGCTGA-GCGAAGAGAGTGTGAAGGGGATTGTGAAGGATGCTGTTGATA 24868748
Query 58198 TCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATT 58257
||||| |||||||| ||| || || ||||| || || |||| ||||| |||
Sbjct 24868749 TCGAACGGGAGTTTGTTTGCGATGCTCTGCCGGTTGCTTTGGTCGGGATGAATGGGGATC 24868808
Query 58258 TGATGTCAAAGTACATTGAGTTTGTTGCCGAC 58289
||||| | || ||||| || || || |||
Sbjct 24868809 TGATGAGTGAATATATTGAATTCGTGGCTGAC 24868840
Score = 174 bits (192), Expect = 1e-38
Identities = 495/752 (66%), Gaps = 14/752 (2%)
Strand=Plus/Minus
Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604
|||||| ||||| | || || || ||| | |||||||| ||||| || || |||||
Sbjct 26603530 CATGTTCCCGATCAAGTACCCCTCGATCTGGGAGATGTACAAGAAGGCCGAGGCCTCGTT 26603471
Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATT---CCCTCAA 57661
||||||| ||| || || || || | ||| | || | ||||| |||| |
Sbjct 26603470 CTGGACCGCCGAGGAGGTCGATCTCAGCCAAGATATCCGCCACTGGGACCAAACCCTAAC 26603411
Query 57662 AGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTAT 57721
| ||| | | || | | ||||| | || || |||||||| ||||| || ||
Sbjct 26603410 CGCCGACGAGCGCCACTTCGTCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCAT 26603351
Query 57722 TGTTAACGAGAATTTGGTCGAAAGATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGA 57779
|| ||||| | | || | ||||| | || || || || | ||||| ||
Sbjct 26603350 CGTCCTGGAGAACCTCGCCGGCCG--TTTCATGAAGGAGGTCCAGGTCGCCGAGGCCAGG 26603293
Query 57780 TGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTC 57839
||| ||||| || || | ||||| || ||| | || || || ||||| ||||| |||
Sbjct 26603292 GCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACTCGCTTCTC 26603233
Query 57840 ATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACA 57899
|||| | ||| | |||||| ||| || || | | || || |||| ||||| ||
Sbjct 26603232 CTCGAATCCTACATCAAGGACTCCGATGAAAAGAGCCGCCTTTTTCACGCCATCGAGACC 26603173
Query 57900 ATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGC 57958
|| || ||| ||||||||||||| |||||| | | || ||||| | || | | |
Sbjct 26603172 ATCCCTTGCG-TCGCCAAGAAGGCCGAGTGGGCGCTGAAGTGGATCGATGGCTCAGAGTC 26603114
Query 57959 CACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAG 58018
||||||||||| | ||||| || || ||||||||| || ||||| || || ||
Sbjct 26603113 T---TTCGCCGAGAGATTGATCGCTTTTGCTTGCGTCGAAGGGATTTTCTTCTCCGGGAG 26603057
Query 58019 CTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAA 58078
|||| || || || ||| | || || ||||| ||||||| || | || ||| ||
Sbjct 26603056 CTTTTGTGCCATTTTCTGGCTTAAAAAGCGCGGATTGATGCCGGGGTTAACCTTTTCAAA 26602997
Query 58079 CGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCA 58138
|||| | ||||| || ||||| || |||||| ||||| || ||| | |||| ||||
Sbjct 26602996 CGAGCTCATATCTCGAGACGAAGGCCTCCATTGCGATTTCGCTTGCTTGTTGTATTCTCT 26602937
Query 58139 CATTGTCAATAAACCGACGCG-GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGA 58197
| ||| || | || ||| || | | || ||| | | || || || | |
Sbjct 26602936 GCTGAACAACAAGCTGA-GCGAAGAGAGTGTGAAGGGGATTGTGAAGGATGCTGTTGATA 26602878
Query 58198 TCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATT 58257
||||| |||||||| ||| || || ||||| || || |||| ||||| |||
Sbjct 26602877 TCGAACGGGAGTTTGTTTGCGATGCTCTGCCGGTTGCTTTGGTCGGGATGAATGGGGATC 26602818
Query 58258 TGATGTCAAAGTACATTGAGTTTGTTGCCGAC 58289
||||| | || ||||| || || || |||
Sbjct 26602817 TGATGAGTGAATATATTGAATTCGTGGCTGAC 26602786
>seq6
Length=78779235
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || || || || || ||||| || ||||| |||| |||||| | ||
Sbjct 3702854 ATGCAGATCTTTGTGAAAACACTAACCGGCAAGACAATCACACTCGAGGTTGAATCCTCT 3702913
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | || ||| || ||| | |||||||||||| | || ||||||||
Sbjct 3702914 GACACCATCGACAATGTTAAAGCAAAGA-TCCAGGACAAGGAAGGGATCCCTCCCGACCA 3702972
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||| ||||| || ||||||||||||||| | || || ||| | ||||| ||
Sbjct 3702973 GCAACGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGCCGGACCCTTGCGGATTACAA 3703032
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||| ||||| || || || || ||||| || ||| | || ||||| ||
Sbjct 3703033 CATCCAAAAGGAGTCTACCCTCCATCTTGTCCTTCGTCTCAGGGGTGG 3703080
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||||||||| || ||||| || || || ||||| ||||| | || || || ||
Sbjct 3703309 CATGCAAATTTTTGTCAAGACCCTAACCGGAAAAACCATCACTCTGGAGGTCGAGAGCTC 3703368
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||| | | | || | ||||| | || |||||||| ||| | || || |||||
Sbjct 3703369 CGATACTATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCA 3703428
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||| | || || |||||||| ||||| | || ||| |||| || ||||| ||
Sbjct 3703429 GCAAAGGCTTATCTTCGCTGGAAAACAACTCGAGGACGGCCGGACTCTGGCTGATTACAA 3703488
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || || ||||| ||||||||||| || || || ||| | || ||
Sbjct 3703489 TATCCAGAAGGAATCCACTCTTCATCTTGTCCTCAGGCTGCGTGGAGG 3703536
>seq8
Length=131339754
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| |||||||| ||||| || ||| | || || || ||
Sbjct 3135993 ATGCAAATTTTCGTTAAGACCCTGACAGGAAAAACCATTACCTTGGAGGTGGAGAGCTCG 3135934
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | ||||| | ||| ||| ||||| ||| | || || || |||
Sbjct 3135933 GATACAATCGACAATGTCAAGGCCAAGATACAGGATAAGGAGGGCATCCCCCCGGATCAG 3135874
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || |||||||| || ||| | || ||| || | ||||| |||
Sbjct 3135873 CAGAGGCTCATCTTCGCTGGGAAGCAGCTTGAGGACGGCCGAACCCTTGCAGATTACAAC 3135814
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || ||||| ||||| || || || || || | || ||||
Sbjct 3135813 ATCCAAAAGGAGTCGACCCTTCACCTTGTGCTCAGGCTTCGTGGTGGTA 3135765
>seq3
Length=113259003
Score = 82.4 bits (90), Expect = 7e-11
Identities = 148/214 (69%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| ||||| || ||||| || || ||||| || ||||| | || || || ||
Sbjct 21885489 CATGCAGATTTTTGTTAAGACCCTAACCGGCAAGACCATCACTTTGGAAGTGGAGAGCTC 21885430
Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
||||| |||| | || ||| || ||| | ||||||||| || | || || ||||
Sbjct 21885429 CGACACCATCGACAATGTGAAAGCAAAGA-TCCAGGACAAGGAGGGAATCCCCCCAGACC 21885371
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
||||| | || || || |||||||| ||| | || || || || |||||||
Sbjct 21885370 AGCAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGGCGAACGTTGGCGGATTATA 21885311
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||||| || || || || || || || || ||
Sbjct 21885310 ACATTCAGAAGGAGTCCACCCTCCACCTTGTCCT 21885277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445700694032640
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