Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq2 149 9e-31
seq4 134 2e-26
seq3174 104 3e-17
seq831 104 3e-17
seq10 104 3e-17
>seq2
Length=84732013
Score = 149 bits (164), Expect = 9e-31
Identities = 551/853 (65%), Gaps = 19/853 (2%)
Strand=Plus/Minus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|| ||||| || || || | || ||||| || || || || || | ||| || ||
Sbjct 24868965 TTCTGGTAATCCCCTACCCTCTTCTCGAAGAAGTTCGTCTTCCCCTGCAACGAAATCAAC 24868906
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
||||| |||||||||| || | | | ||| | |||| || ||||| | | |
Sbjct 24868905 TCCATCCAATCAAACGGGTTCGAAGCTCCATACAACTTTTCAATCCCCAAAGCCCCCAAC 24868846
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848
|| | || || || ||||| |||||| |||||| || | |||||| || | |
Sbjct 24868845 AAGCGGTCAGCCACGAATTCAATATATTCACTCATCAGATCCCCATTCATCCCGACCAAA 24868786
Query 49849 TTAACTGGAAGAGC--CGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906
||| || ||||| |||| || ||| || |||| || || ||||| | | ||
Sbjct 24868785 GCAACCGGCAGAGCATCGCA--AACAAACTCCCGTTCGATATCAACAGCATCCTTCACAA 24868728
Query 49907 TAGATCTAACGGTTTCTTCACTCGG-TGGATG--CAATAAATGTTTAAACATCAAACATG 49963
| | || | ||||| ||| | | | || || | | | ||| ||| || |
Sbjct 24868727 TCCCCTTCACACTCTCTTCGCTCAGCTTGTTGTTCAGCAGAGAAT---ACAACAAGCAAG 24868671
Query 49964 CGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGG 50023
|||||||||| || || || ||||||| | || || ||||| ||||| || | || |
Sbjct 24868670 CGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAACCCCG 24868611
Query 50024 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG-ACCCAGAAAAGAAGATT 50082
|||| | || |||||||||||||| || |||| | |||| | ||| || ||||| ||
Sbjct 24868610 GCATCAATCCGCGCTTTTTAAGCCAGAAAATGG-CACAAAAGCTCCCGGAGAAGAAAATC 24868552
Query 50083 CCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT--GTCATGTATCC 50140
||||| || ||||| || | | |||||| | || | | || | ||| ||||
Sbjct 24868551 CCTTCGACGCAAGCAAAAGCGATCAATCTCTCGGCGAAA--GACTCTGAGCCATCGATCC 24868494
Query 50141 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGA 50200
|||| | ||||| ||||||||||| || ||||| || || || ||||| | ||| |
Sbjct 24868493 ACTTCAGCGCCCACTCGGCCTTCTTGGCGACGCAAGGGATGGTCTCGATGGCGTGAAAAA 24868434
Query 50201 GATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCG 50260
| | | ||||||| || || | || | |||| | ||| ||||| || |
Sbjct 24868433 GGCGGCTCTTTTCATCGGAGTCCTTGATGTAGGATTCGAGGAGAAGCGAGTACATCTCGG 24868374
Query 50261 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCA 50320
| || ||||| || ||||| ||||| || |||||||| || ||||||| | ||| |
Sbjct 24868373 AGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACCTGGA 24868314
Query 50321 CTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 50380
| || | || || | || | || || || || ||||| ||| || || |
Sbjct 24868313 CCTCCTTCATGAAACGGCCGGCGAGGTTCTCCAGGACGATGCCGTCGGAGGCGGCGAAGA 24868254
Query 50381 ACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAG---TTTATTCCAATCAT 50437
| || | || || | | || || |||| || ||||| || | ||| |
Sbjct 24868253 AGGCGAGGACGTGGGTGACGAAGTGGCGCTCGTCGGCGGTTAGGGTTTGGTCCCAGTGGC 24868194
Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 50497
|||||||| | ||| || || || | ||||| || || ||||| ||||| || |
Sbjct 24868193 GGATATCTTGGCTGAGATCGACCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGT 24868134
Query 50498 ACATATTCCAGAT 50510
|||| | ||||||
Sbjct 24868133 ACATCTCCCAGAT 24868121
Score = 149 bits (164), Expect = 9e-31
Identities = 551/853 (65%), Gaps = 19/853 (2%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|| ||||| || || || | || ||||| || || || || || | ||| || ||
Sbjct 26602661 TTCTGGTAATCCCCTACCCTCTTCTCGAAGAAGTTCGTCTTCCCCTGCAACGAAATCAAC 26602720
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
||||| |||||||||| || | | | ||| | |||| || ||||| | | |
Sbjct 26602721 TCCATCCAATCAAACGGGTTCGAAGCTCCATACAACTTTTCAATCCCCAAAGCCCCCAAC 26602780
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848
|| | || || || ||||| |||||| |||||| || | |||||| || | |
Sbjct 26602781 AAGCGGTCAGCCACGAATTCAATATATTCACTCATCAGATCCCCATTCATCCCGACCAAA 26602840
Query 49849 TTAACTGGAAGAGC--CGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906
||| || ||||| |||| || ||| || |||| || || ||||| | | ||
Sbjct 26602841 GCAACCGGCAGAGCATCGCA--AACAAACTCCCGTTCGATATCAACAGCATCCTTCACAA 26602898
Query 49907 TAGATCTAACGGTTTCTTCACTCGG-TGGATG--CAATAAATGTTTAAACATCAAACATG 49963
| | || | ||||| ||| | | | || || | | | ||| ||| || |
Sbjct 26602899 TCCCCTTCACACTCTCTTCGCTCAGCTTGTTGTTCAGCAGAGAAT---ACAACAAGCAAG 26602955
Query 49964 CGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGG 50023
|||||||||| || || || ||||||| | || || ||||| ||||| || | || |
Sbjct 26602956 CGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAACCCCG 26603015
Query 50024 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG-ACCCAGAAAAGAAGATT 50082
|||| | || |||||||||||||| || |||| | |||| | ||| || ||||| ||
Sbjct 26603016 GCATCAATCCGCGCTTTTTAAGCCAGAAAATGG-CACAAAAGCTCCCGGAGAAGAAAATC 26603074
Query 50083 CCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT--GTCATGTATCC 50140
||||| || ||||| || | | |||||| | || | | || | ||| ||||
Sbjct 26603075 CCTTCGACGCAAGCAAAAGCGATCAATCTCTCGGCGAAA--GACTCTGAGCCATCGATCC 26603132
Query 50141 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGA 50200
|||| | ||||| ||||||||||| || ||||| || || || ||||| | ||| |
Sbjct 26603133 ACTTCAGCGCCCACTCGGCCTTCTTGGCGACGCAAGGGATGGTCTCGATGGCGTGAAAAA 26603192
Query 50201 GATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCG 50260
| | | ||||||| || || | || | |||| | ||| ||||| || |
Sbjct 26603193 GGCGGCTCTTTTCATCGGAGTCCTTGATGTAGGATTCGAGGAGAAGCGAGTACATCTCGG 26603252
Query 50261 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCA 50320
| || ||||| || ||||| ||||| || |||||||| || ||||||| | ||| |
Sbjct 26603253 AGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACCTGGA 26603312
Query 50321 CTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 50380
| || | || || | || | || || || || ||||| ||| || || |
Sbjct 26603313 CCTCCTTCATGAAACGGCCGGCGAGGTTCTCCAGGACGATGCCGTCGGAGGCGGCGAAGA 26603372
Query 50381 ACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAG---TTTATTCCAATCAT 50437
| || | || || | | || || |||| || ||||| || | ||| |
Sbjct 26603373 AGGCGAGGACGTGGGTGACGAAGTGGCGCTCGTCGGCGGTTAGGGTTTGGTCCCAGTGGC 26603432
Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 50497
|||||||| | ||| || || || | ||||| || || ||||| ||||| || |
Sbjct 26603433 GGATATCTTGGCTGAGATCGACCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGT 26603492
Query 50498 ACATATTCCAGAT 50510
|||| | ||||||
Sbjct 26603493 ACATCTCCCAGAT 26603505
>seq4
Length=146560859
Score = 134 bits (148), Expect = 2e-26
Identities = 173/236 (73%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 80327 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA 80386
||||| ||| || ||||||||||||||||||||||| || |||||||| | ||||
Sbjct 9258805 GACGAGGAGTGCCAGCATTAAATAAGGTAGGAGAAGCATGTGTAAACCACCGCTGTGACA 9258746
Query 80387 GTAGATTGTACGTCTCAATAGCTGATTCTATATCC-CATTGATGAATTCCTACCGCGACA 80445
||||| ||| || | | ||| || || ||||| | ||| |||||||| || || ||
Sbjct 9258745 TTAGATGGTATGTTTTGACAGCAGAATCAATATCTTCCTTG-TGAATTCCAACAGCAACT 9258687
Query 80446 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGAT 80505
| ||| | |||||| ||||||||||| || | ||| | | | ||| || | || |||
Sbjct 9258686 CTCATCAGCATGTGTTGAGGTCTTTCTACAACCTTTTCAGAGACTTTTAAGAGATAGGAT 9258627
Query 80506 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561
| || | |||||| |||||||| |||| || |||||||| || ||||| ||
Sbjct 9258626 CTCTCAAGAGTTTTGAAACCAAAGTAGTCATAATCAAAGTCTCTATCATAAATTAT 9258571
>seq3174
Length=2385
Score = 104 bits (114), Expect = 3e-17
Identities = 118/156 (76%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 80323 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 80382
||| ||||| ||| || |||||||||||||||||||||| || |||||||| |
Sbjct 1318 TGGGGACGAGGAGTGCCAACATTAAATAAGGTAGGAGAAGCATGTGTAAACCACCGCTGT 1377
Query 80383 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGC 80441
|||| ||||| ||| || | | ||| || || ||||| | ||| |||||||| || ||
Sbjct 1378 GACATTAGATGGTATGTTTTGACAGCAGAATCAATATCTTCCTTG-TGAATTCCAACAGC 1436
Query 80442 GACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 80477
|| | ||| | |||||| ||||||||||| || ||
Sbjct 1437 AACTCTCATCAGCATGTGTTGAGGTCTTTCTACAAT 1472
>seq831
Length=51122
Score = 104 bits (114), Expect = 3e-17
Identities = 118/156 (76%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 80323 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 80382
||| ||||| ||| || |||||||||||||||||||||| || |||||||| |
Sbjct 19017 TGGGGACGAGGAGTGCCAACATTAAATAAGGTAGGAGAAGCATGTGTAAACCACCGCTGT 19076
Query 80383 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGC 80441
|||| ||||| ||| || | | ||| || || ||||| | ||| |||||||| || ||
Sbjct 19077 GACATTAGATGGTATGTTTTGACAGCAGAATCAATATCTTCCTTG-TGAATTCCAACAGC 19135
Query 80442 GACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 80477
|| | ||| | |||||| ||||||||||| || ||
Sbjct 19136 AACTCTCATCAGCATGTGTTGAGGTCTTTCTACAAT 19171
>seq10
Length=73452336
Score = 104 bits (114), Expect = 3e-17
Identities = 118/156 (76%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 80323 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 80382
||| ||||| ||| || |||||||||||||||||||||| || |||||||| |
Sbjct 1168067 TGGGGACGAGGAGTGCCAACATTAAATAAGGTAGGAGAAGCATGTGTAAACCACCGCTGT 1168008
Query 80383 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC-CATTGATGAATTCCTACCGC 80441
|||| ||||| ||| || | | ||| || || ||||| | ||| |||||||| || ||
Sbjct 1168007 GACATTAGATGGTATGTTTTGACAGCAGAATCAATATCTTCCTTG-TGAATTCCAACAGC 1167949
Query 80442 GACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 80477
|| | ||| | |||||| ||||||||||| || ||
Sbjct 1167948 AACTCTCATCAGCATGTGTTGAGGTCTTTCTACAAT 1167913
Score = 104 bits (114), Expect = 3e-17
Identities = 118/156 (76%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 80323 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 80382
||| ||||| ||| || |||||||||||||||||||||| || |||||||| |
Sbjct 24507686 TGGGGACGAGGAGTGCCAACATTAAATAAGGTAGGAGAAGCATGTGTAAACCACCGCTGT 24507745
Query 80383 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGC 80441
|||| ||||| ||| || | | ||| || || ||||| | ||| |||||||| || ||
Sbjct 24507746 GACATTAGATGGTATGTTTTGACAGCAGAATCAATATCTTCCTTG-TGAATTCCAACAGC 24507804
Query 80442 GACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 80477
|| | ||| | |||||| ||||||||||| || ||
Sbjct 24507805 AACTCTCATCAGCATGTGTTGAGGTCTTTCTACAAT 24507840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718162927178880
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