Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 8e-17
>seq2
Length=84732013
Score = 102 bits (112), Expect = 8e-17
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 13869 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13928
|| || || ||||| ||||| ||||| || |||| | || || ||||||||||| |||
Sbjct 24868677 AAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTT 24868618
Query 13929 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAG 13988
|| || ||||||||||| || ||||| | ||| || || ||| ||| |||||| |||
Sbjct 24868617 AACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCACAAAAGCTCCCGGAGAAG 24868558
Query 13989 AATATTCCCTCAACTGCAGCAAACGCTATTAATC 14022
|| || || || || |||||| || || ||||
Sbjct 24868557 AAAATCCCTTCGACGCAAGCAAAAGCGATCAATC 24868524
Score = 102 bits (112), Expect = 8e-17
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 13869 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13928
|| || || ||||| ||||| ||||| || |||| | || || ||||||||||| |||
Sbjct 26602949 AAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTT 26603008
Query 13929 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAG 13988
|| || ||||||||||| || ||||| | ||| || || ||| ||| |||||| |||
Sbjct 26603009 AACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCACAAAAGCTCCCGGAGAAG 26603068
Query 13989 AATATTCCCTCAACTGCAGCAAACGCTATTAATC 14022
|| || || || || |||||| || || ||||
Sbjct 26603069 AAAATCCCTTCGACGCAAGCAAAAGCGATCAATC 26603102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479657288092800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |