Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06] 11,792 sequences; 1,187,538,024 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 4e-14 >seq2 Length=84732013 Score = 93.3 bits (102), Expect = 4e-14 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716 || || || ||||| ||||| ||||| || |||| | || || ||||||||||| ||| Sbjct 24868677 AAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTT 24868618 Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGAT-CCGGAAAA 13775 || || ||||||||||| || ||||| | ||| || || ||| | || | | ||||| || Sbjct 24868617 AACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCA-CAAAAGCTCCCGGAGAA 24868559 Query 13776 GAATATTCCCTCAACTGCAGCAAACGCTAT 13805 ||| || || || || |||||| || || Sbjct 24868558 GAAAATCCCTTCGACGCAAGCAAAAGCGAT 24868529 Score = 93.3 bits (102), Expect = 4e-14 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716 || || || ||||| ||||| ||||| || |||| | || || ||||||||||| ||| Sbjct 26602949 AAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTT 26603008 Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGAT-CCGGAAAA 13775 || || ||||||||||| || ||||| | ||| || || ||| | || | | ||||| || Sbjct 26603009 AACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCA-CAAAAGCTCCCGGAGAA 26603067 Query 13776 GAATATTCCCTCAACTGCAGCAAACGCTAT 13805 ||| || || || || |||||| || || Sbjct 26603068 GAAAATCCCTTCGACGCAAGCAAAAGCGAT 26603097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478518256010880