Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 4e-14
>seq2
Length=84732013
Score = 93.3 bits (102), Expect = 4e-14
Identities = 112/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716
|| || || ||||| ||||| ||||| || |||| | || || ||||||||||| |||
Sbjct 24868677 AAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTT 24868618
Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGAT-CCGGAAAA 13775
|| || ||||||||||| || ||||| | ||| || || ||| | || | | ||||| ||
Sbjct 24868617 AACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCA-CAAAAGCTCCCGGAGAA 24868559
Query 13776 GAATATTCCCTCAACTGCAGCAAACGCTAT 13805
||| || || || || |||||| || ||
Sbjct 24868558 GAAAATCCCTTCGACGCAAGCAAAAGCGAT 24868529
Score = 93.3 bits (102), Expect = 4e-14
Identities = 112/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716
|| || || ||||| ||||| ||||| || |||| | || || ||||||||||| |||
Sbjct 26602949 AAGCAAGCGAAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTT 26603008
Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGAT-CCGGAAAA 13775
|| || ||||||||||| || ||||| | ||| || || ||| | || | | ||||| ||
Sbjct 26603009 AACCCCGGCATCAATCCGCGCTTTTTAAGCCAGAAAATGGCA-CAAAAGCTCCCGGAGAA 26603067
Query 13776 GAATATTCCCTCAACTGCAGCAAACGCTAT 13805
||| || || || || |||||| || ||
Sbjct 26603068 GAAAATCCCTTCGACGCAAGCAAAAGCGAT 26603097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478518256010880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |