Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asparagus_20officinalis_20[refseq_20GCF_5F001876935.1_202017-02-06]
11,792 sequences; 1,187,538,024 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq2 145 1e-29
seq4 131 2e-25
seq3174 95.1 2e-14
seq831 95.1 2e-14
seq10 95.1 2e-14
>seq2
Length=84732013
Score = 145 bits (160), Expect = 1e-29
Identities = 434/662 (66%), Gaps = 12/662 (2%)
Strand=Plus/Minus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|| ||||| || || || | || ||||| || || ||||| || | ||| || ||
Sbjct 24868965 TTCTGGTAATCCCCTACCCTCTTCTCGAAGAAGTTCGTCTTCCCCTGCAACGAAATCAAC 24868906
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893
||||| |||||||||| || | | | ||| | |||| || ||||| | | |
Sbjct 24868905 TCCATCCAATCAAACGGGTTCGAAGCTCCATACAACTTTTCAATCCCCAAAGCCCCCAAC 24868846
Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953
|| | || || | |||||| |||||| |||||| || | |||||| || | |
Sbjct 24868845 AAGCGGTCAGCCACGAATTCAATATATTCACTCATCAGATCCCCATTCATCCCGACCAAA 24868786
Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013
||| || ||||| | || ||| || |||| ||| || || || | | |||
Sbjct 24868785 GCAACCGGCAGAGCATCGCAAACAAACTCCCGTTCGATATCAACAGCATCCTTCACAATC 24868726
Query 42014 GATCTTACTGTTTCTTCACTCGG--TGGA-TACAATAAATGTTTAAACATCAAACATGCG 42070
| || | ||||| ||| | || | || | | | ||| ||| || |||
Sbjct 24868725 CCCTTCACACTCTCTTCGCTCAGCTTGTTGTTCAGCAGAGAAT---ACAACAAGCAAGCG 24868669
Query 42071 AAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 42130
|||||||| || || || || |||| | || | ||||| ||||| || | || |||
Sbjct 24868668 AAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAACCCCGGC 24868609
Query 42131 ATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT-CCAGAAAAGAAGATTCC 42189
|| | || |||||||||||||| || || | | |||| | | || || ||||| || ||
Sbjct 24868608 ATCAATCCGCGCTTTTTAAGCCAGAAAAT-GGCACAAAAGCTCCCGGAGAAGAAAATCCC 24868550
Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT--GTCATGTATCCAC 42247
||| || ||||| || || | |||||| | || | | || | ||| ||||||
Sbjct 24868549 TTCGACGCAAGCAAAAGCGATCAATCTCTCGGCGAAA--GACTCTGAGCCATCGATCCAC 24868492
Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307
|| | ||||| ||||||||||| || ||||| || || || ||||| | ||| ||
Sbjct 24868491 TTCAGCGCCCACTCGGCCTTCTTGGCGACGCAAGGGATGGTCTCGATGGCGTGAAAAAGG 24868432
Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAA 42367
| | ||||||| || || | || | |||| | ||| ||||| || ||
Sbjct 24868431 CGGCTCTTTTCATCGGAGTCCTTGATGTAGGATTCGAGGAGAAGCGAGTACATCTCGGAG 24868372
Query 42368 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACT 42427
|| ||||| || ||||| ||||| || |||||||| |||||||||| ||||| ||
Sbjct 24868371 TGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACCTGGACC 24868312
Query 42428 TC 42429
||
Sbjct 24868311 TC 24868310
Score = 145 bits (160), Expect = 1e-29
Identities = 434/662 (66%), Gaps = 12/662 (2%)
Strand=Plus/Plus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|| ||||| || || || | || ||||| || || ||||| || | ||| || ||
Sbjct 26602661 TTCTGGTAATCCCCTACCCTCTTCTCGAAGAAGTTCGTCTTCCCCTGCAACGAAATCAAC 26602720
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893
||||| |||||||||| || | | | ||| | |||| || ||||| | | |
Sbjct 26602721 TCCATCCAATCAAACGGGTTCGAAGCTCCATACAACTTTTCAATCCCCAAAGCCCCCAAC 26602780
Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953
|| | || || | |||||| |||||| |||||| || | |||||| || | |
Sbjct 26602781 AAGCGGTCAGCCACGAATTCAATATATTCACTCATCAGATCCCCATTCATCCCGACCAAA 26602840
Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013
||| || ||||| | || ||| || |||| ||| || || || | | |||
Sbjct 26602841 GCAACCGGCAGAGCATCGCAAACAAACTCCCGTTCGATATCAACAGCATCCTTCACAATC 26602900
Query 42014 GATCTTACTGTTTCTTCACTCGG--TGGA-TACAATAAATGTTTAAACATCAAACATGCG 42070
| || | ||||| ||| | || | || | | | ||| ||| || |||
Sbjct 26602901 CCCTTCACACTCTCTTCGCTCAGCTTGTTGTTCAGCAGAGAAT---ACAACAAGCAAGCG 26602957
Query 42071 AAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 42130
|||||||| || || || || |||| | || | ||||| ||||| || | || |||
Sbjct 26602958 AAATCGCAATGGAGGCCTTCGTCTCGAGATATGAGCTCGTTTGAAAAGGTTAACCCCGGC 26603017
Query 42131 ATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT-CCAGAAAAGAAGATTCC 42189
|| | || |||||||||||||| || || | | |||| | | || || ||||| || ||
Sbjct 26603018 ATCAATCCGCGCTTTTTAAGCCAGAAAAT-GGCACAAAAGCTCCCGGAGAAGAAAATCCC 26603076
Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT--GTCATGTATCCAC 42247
||| || ||||| || || | |||||| | || | | || | ||| ||||||
Sbjct 26603077 TTCGACGCAAGCAAAAGCGATCAATCTCTCGGCGAAA--GACTCTGAGCCATCGATCCAC 26603134
Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307
|| | ||||| ||||||||||| || ||||| || || || ||||| | ||| ||
Sbjct 26603135 TTCAGCGCCCACTCGGCCTTCTTGGCGACGCAAGGGATGGTCTCGATGGCGTGAAAAAGG 26603194
Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAA 42367
| | ||||||| || || | || | |||| | ||| ||||| || ||
Sbjct 26603195 CGGCTCTTTTCATCGGAGTCCTTGATGTAGGATTCGAGGAGAAGCGAGTACATCTCGGAG 26603254
Query 42368 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACT 42427
|| ||||| || ||||| ||||| || |||||||| |||||||||| ||||| ||
Sbjct 26603255 TGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACCTGGACC 26603314
Query 42428 TC 42429
||
Sbjct 26603315 TC 26603316
>seq4
Length=146560859
Score = 131 bits (144), Expect = 2e-25
Identities = 172/236 (73%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 72410 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA 72469
||||| ||| || ||||||||||||||||||||||| || |||||||| | ||||
Sbjct 9258805 GACGAGGAGTGCCAGCATTAAATAAGGTAGGAGAAGCATGTGTAAACCACCGCTGTGACA 9258746
Query 72470 GTAGATTGTACGTCTCAATAGCTGATTCTATATCC-CATTGATGTATTCCTACCGCGACA 72528
||||| ||| || | | ||| || || ||||| | ||| || ||||| || || ||
Sbjct 9258745 TTAGATGGTATGTTTTGACAGCAGAATCAATATCTTCCTTG-TGAATTCCAACAGCAACT 9258687
Query 72529 CGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGAT 72588
| ||| | ||| || ||||||||||| || | ||| | | | ||| || | ||||||
Sbjct 9258686 CTCATCAGCATGTGTTGAGGTCTTTCTACAACCTTTTCAGAGACTTTTAAGAGATAGGAT 9258627
Query 72589 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644
| || | |||||| |||||||| |||| || |||||||| || ||||| ||
Sbjct 9258626 CTCTCAAGAGTTTTGAAACCAAAGTAGTCATAATCAAAGTCTCTATCATAAATTAT 9258571
Score = 86.0 bits (94), Expect = 8e-12
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236
||| || ||||| | || | ||| |||| |||| | || || |||||||| | ||||||
Sbjct 9259125 TCCCCCTTGATCAACATAGCGAGCAGTGTCATTAAACACCCTTAACATTGGGACAATACC 9259066
Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296
||| || | || || || || ||||| || || | |||||||||||| || ||
Sbjct 9259065 ATTAGAAGTTCCGTTTGTTCCACGAATATAACTGCCCATTGCACGAATATTGTGAACAGA 9259006
Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356
| ||| ||||| || || ||| || | || || || | || ||||| ||
Sbjct 9259005 AACACCAATTCCTCCAGCAGATTTGCTTATAACAGCACACTCCTTGAGAGTGTCATATAT 9258946
Query 72357 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 72398
|||||| ||||||||||| |||| || || || |||||
Sbjct 9258945 GCCCTCGATACTATCATCTTTCATACAAATAAGGAAGCAGCT 9258904
>seq3174
Length=2385
Score = 95.1 bits (104), Expect = 2e-14
Identities = 116/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 72406 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 72465
||| ||||| ||| || |||||||||||||||||||||| || |||||||| |
Sbjct 1318 TGGGGACGAGGAGTGCCAACATTAAATAAGGTAGGAGAAGCATGTGTAAACCACCGCTGT 1377
Query 72466 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCCTACCGC 72524
|||| ||||| ||| || | | ||| || || ||||| | ||| || ||||| || ||
Sbjct 1378 GACATTAGATGGTATGTTTTGACAGCAGAATCAATATCTTCCTTG-TGAATTCCAACAGC 1436
Query 72525 GACACGCATTAACATATGCTGAGGTCTTTCAACGAT 72560
|| | ||| | ||| || ||||||||||| || ||
Sbjct 1437 AACTCTCATCAGCATGTGTTGAGGTCTTTCTACAAT 1472
>seq831
Length=51122
Score = 95.1 bits (104), Expect = 2e-14
Identities = 116/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 72406 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 72465
||| ||||| ||| || |||||||||||||||||||||| || |||||||| |
Sbjct 19017 TGGGGACGAGGAGTGCCAACATTAAATAAGGTAGGAGAAGCATGTGTAAACCACCGCTGT 19076
Query 72466 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCCTACCGC 72524
|||| ||||| ||| || | | ||| || || ||||| | ||| || ||||| || ||
Sbjct 19077 GACATTAGATGGTATGTTTTGACAGCAGAATCAATATCTTCCTTG-TGAATTCCAACAGC 19135
Query 72525 GACACGCATTAACATATGCTGAGGTCTTTCAACGAT 72560
|| | ||| | ||| || ||||||||||| || ||
Sbjct 19136 AACTCTCATCAGCATGTGTTGAGGTCTTTCTACAAT 19171
>seq10
Length=73452336
Score = 95.1 bits (104), Expect = 2e-14
Identities = 116/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 72406 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 72465
||| ||||| ||| || |||||||||||||||||||||| || |||||||| |
Sbjct 1168067 TGGGGACGAGGAGTGCCAACATTAAATAAGGTAGGAGAAGCATGTGTAAACCACCGCTGT 1168008
Query 72466 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC-CATTGATGTATTCCTACCGC 72524
|||| ||||| ||| || | | ||| || || ||||| | ||| || ||||| || ||
Sbjct 1168007 GACATTAGATGGTATGTTTTGACAGCAGAATCAATATCTTCCTTG-TGAATTCCAACAGC 1167949
Query 72525 GACACGCATTAACATATGCTGAGGTCTTTCAACGAT 72560
|| | ||| | ||| || ||||||||||| || ||
Sbjct 1167948 AACTCTCATCAGCATGTGTTGAGGTCTTTCTACAAT 1167913
Score = 95.1 bits (104), Expect = 2e-14
Identities = 116/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 72406 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 72465
||| ||||| ||| || |||||||||||||||||||||| || |||||||| |
Sbjct 24507686 TGGGGACGAGGAGTGCCAACATTAAATAAGGTAGGAGAAGCATGTGTAAACCACCGCTGT 24507745
Query 72466 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCCTACCGC 72524
|||| ||||| ||| || | | ||| || || ||||| | ||| || ||||| || ||
Sbjct 24507746 GACATTAGATGGTATGTTTTGACAGCAGAATCAATATCTTCCTTG-TGAATTCCAACAGC 24507804
Query 72525 GACACGCATTAACATATGCTGAGGTCTTTCAACGAT 72560
|| | ||| | ||| || ||||||||||| || ||
Sbjct 24507805 AACTCTCATCAGCATGTGTTGAGGTCTTTCTACAAT 24507840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671040274081920
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